PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01175g01017.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 359aa    MW: 40490 Da    PI: 6.9629
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01175g01017.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.78.2e-52141391128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWka
  Peinf101Scf01175g01017.1  14 LPPGFRFYPTDEELLVQYLCRKVAGHDFSL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKA 97 
                               79***************************9.89***************7777799****************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  Peinf101Scf01175g01017.1  98 TGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                               *****9999.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-669162IPR003441NAC domain
PROSITE profilePS5100560.37714162IPR003441NAC domain
PfamPF023653.7E-2615139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MGVQETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FSLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLS EPSRKHGSSR LDDWVLCRIY KKNSGGQKPN IPGLNTNEIS  180
HGSSSSSSSQ FDDMLESLPE IEDKYFSLPR MNSIRNFQQD EKLNNLQQLG SGNFDWATLA  240
GINSFQDLGT GNQAGPQGTQ ALVHLNNHNY NNNSNLNNNV NEFFAHPTQL NFHGDVDVKF  300
ETGIDEEVQS GIRSQRINNP VFFQGNSTGF TDTYTNSVDP FGIRYPIQTV NMGFSQVNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-11211687174NAC domain-containing protein 19
3swm_B1e-11211687174NAC domain-containing protein 19
3swm_C1e-11211687174NAC domain-containing protein 19
3swm_D1e-11211687174NAC domain-containing protein 19
3swp_A1e-11211687174NAC domain-containing protein 19
3swp_B1e-11211687174NAC domain-containing protein 19
3swp_C1e-11211687174NAC domain-containing protein 19
3swp_D1e-11211687174NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264575.10.0PREDICTED: NAC domain-containing protein 72-like
SwissprotA0A3Q7HH640.0JA2L_SOLLC; NAC domain-containing protein JA2L
TrEMBLA0A314L5D70.0A0A314L5D7_NICAT; Nac domain-containing protein 72
STRINGXP_009594219.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31222452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-130NAC family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]