PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01151g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bZIP | ||||||||
Protein Properties | Length: 243aa MW: 27676.2 Da PI: 10.3521 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.2 | 2.3e-10 | 38 | 82 | 2 | 46 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Peinf101Scf01151g00005.1 38 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 82 567899*************************98888887776554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-8 | 34 | 84 | No hit | No description |
SMART | SM00338 | 1.3E-8 | 37 | 100 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.461 | 39 | 83 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-7 | 40 | 82 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-7 | 41 | 84 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 44 | 59 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.7E-30 | 124 | 195 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MVDISPSTST DADTDEKNRY LNAQQLVAVA SDGSDRTRDQ KTLRRLAQNR EAARKSRLRK 60 KAYVQQLESS RMKLTQLEQE LQRARQQGIF ISGSGDQSQS MSGNGALAFD VEYARWLEEH 120 NRRVNELRGA VNSHAGDAEL RIIVDGILAH YDDIFRIKGD AAKADVFHIL SGMWKTPAER 180 CFLWLGGFRS SELLKADNLR QQTLQQMHRI LTTRQSARAL LAISDYFSRL RALSSLWLAR 240 PRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF031487 | 0.0 | AF031487.1 Nicotiana tabacum bZIP transcription factor (TGA2.2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022850452.1 | 1e-141 | transcription factor TGA2.3-like isoform X2 | ||||
Swissprot | P23923 | 1e-106 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | A0A1J6KFU5 | 1e-133 | A0A1J6KFU5_NICAT; Transcription factor tga2 | ||||
TrEMBL | A0A1U7XYD3 | 1e-133 | A0A1U7XYD3_NICSY; transcription factor TGA2-like | ||||
TrEMBL | Q9SQK1 | 1e-133 | Q9SQK1_TOBAC; BZIP transcription factor | ||||
STRING | XP_009794636.1 | 1e-134 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21364 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 9e-86 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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