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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf01136g07007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
HSF |
| Protein Properties |
Length: 199aa MW: 23275.7 Da PI: 10.0434 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01136g07007.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 110.3 | 1.3e-34 | 25 | 120 | 2 | 103 |
HHHHHHHHHCTG...GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS
HSF_DNA-bind 2 Flkklyeilede...elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83
Fl k+y++le+e +++++sw+e+g+ fvv+ ++ef++ +LpkyFkh+nf+SF+RQLn+YgFkkv +++ weF+h
Peinf101Scf01136g07007.1 25 FLLKTYDLLEEEnisGNNKVVSWNEEGTGFVVWSPDEFSEFMLPKYFKHNNFSSFIRQLNTYGFKKVASKR---------WEFSH 100
9*********884445689*************************************************999.........***** PP
SXXXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 84 ksFkkgkkellekikrkkse 103
++F++g k+ll ki rkks+
Peinf101Scf01136g07007.1 101 EKFQRGCKHLLAKITRKKSD 120
*****************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MGTEALGTPE DLTTISRKIK CPAPFLLKTY DLLEEENISG NNKVVSWNEE GTGFVVWSPD 60
EFSEFMLPKY FKHNNFSSFI RQLNTYGFKK VASKRWEFSH EKFQRGCKHL LAKITRKKSD 120
PSAFPAYLKP SSDHQGNYIM AAKEKNITRQ LLMEENKNLR KERLELQMQI AHFKNLETKL 180
LQCLSNYVSS QQNKVRRLF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5hdk_A | 1e-17 | 21 | 119 | 7 | 112 | Heat shock factor protein 2 |
| 5hdk_B | 1e-17 | 21 | 119 | 7 | 112 | Heat shock factor protein 2 |
| 5hdk_C | 1e-17 | 21 | 119 | 7 | 112 | Heat shock factor protein 2 |
| 5hdk_D | 1e-17 | 21 | 119 | 7 | 112 | Heat shock factor protein 2 |
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