PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01077g20034.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 211aa    MW: 23583.4 Da    PI: 4.5806
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01077g20034.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.51e-101443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              +g+WT+eEd++l+++++ +G+g+W+t ++ 
  Peinf101Scf01077g20034.1 14 KGPWTPEEDLKLIQYIQVHGPGNWRTLPKN 43
                              79************************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.5E-14543IPR009057Homeodomain-like
SuperFamilySSF466891.87E-9943IPR009057Homeodomain-like
PROSITE profilePS5129411.435956IPR017930Myb domain
SMARTSM007170.00811362IPR001005SANT/Myb domain
PfamPF002491.1E-81443IPR001005SANT/Myb domain
CDDcd001675.45E-71647No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MGRSPCCDKN GLKKGPWTPE EDLKLIQYIQ VHGPGNWRTL PKNAVFRLAT TLLASHNNEN  60
PELLLQKLQE NQLLNTQLQQ NQLLNTPLGN HLQVFQPSSQ FQNQIQEIPT FTPSNVPCSS  120
SQPMQLGPVE LSYLMNGQML PPQNYGYCAS NVSDSSNLQS LNSSNNQNSS NFSLDSVLST  180
PLSSTEDEKE SYCSNLMKFE IPASLNFDDF M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754465e-41HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009596250.16e-79PREDICTED: transcription factor MYB39
RefseqXP_016456555.16e-79PREDICTED: transcription factor MYB39-like
TrEMBLA0A1S3YWW71e-77A0A1S3YWW7_TOBAC; transcription factor MYB39-like
STRINGXP_009596250.12e-78(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.11e-23myb domain protein 41