 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf01057g02002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 333aa MW: 37298.9 Da PI: 9.1216 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01057g02002.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 177.4 | 3.8e-55 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeel+++yL +k++++++++ ++i +vd++k+ePwdLp k+k + kewyfFs rd+ky+tg r+nrat++gyWk+
Peinf101Scf01057g02002.1 10 LPPGFRFHPTDEELITYYLVNKISDSTFTA-RAIGDVDLNKSEPWDLPGKAKMGVKEWYFFSLRDRKYPTGVRTNRATNTGYWKT 93
79*************************999.89***************999999******************************* PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tgkdke++++ ++elvg+kktLvfykgrap+gekt+Wvmheyr+
Peinf101Scf01057g02002.1 94 TGKDKEIFNSsTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRI 137
********9878889***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MEGEVKEETL PPGFRFHPTD EELITYYLVN KISDSTFTAR AIGDVDLNKS EPWDLPGKAK 60
MGVKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI FNSSTSELVG MKKTLVFYKG 120
RAPRGEKTNW VMHEYRIHSK SSYRTHKQDE WVVCRVFQKS AGGKKYPSNN SRAVNVNPYT 180
LEIIPSTMSS QMMQADHGFQ LAMGRGYMNH AEIQEFNRVF RGGSSSSMSF PIQSQMNYNL 240
GGGNSGGGGN CFTISGLNLN LGGGATTSQP ILRPMTSPPP QPTQVMNQQD MSTNVLMTSE 300
TAGYGADVSN GNAMNRFMAM ENCADLENYW PTY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-55 | 9 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-55 | 9 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-55 | 9 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-55 | 9 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-55 | 9 | 165 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-55 | 9 | 165 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-55 | 9 | 165 | 16 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
