PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00974g17007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 31108.4 Da PI: 5.7938

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00974g17007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.7	3.5e-17	79	132	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa+ k Peinf101Scf00974g17007.1 79 KKRRLNLEQVKALERSFELGNKLEPERKIQLARALGLQPRQIAIWFQNRRARCK 132 4557899*********************************************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.45E-18	72	136	IPR009057	Homeodomain-like
SMART	SM00389	3.4E-18	77	138	IPR001356	Homeobox domain
PROSITE profile	PS50071	16.082	78	134	IPR001356	Homeobox domain
CDD	cd00086	2.05E-16	79	135	No hit	No description
Pfam	PF00046	2.2E-14	79	132	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	4.3E-18	81	141	IPR009057	Homeodomain-like
PRINTS	PR00031	1.5E-5	105	114	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	109	132	IPR017970	Homeobox, conserved site
PRINTS	PR00031	1.5E-5	114	130	IPR000047	Helix-turn-helix motif
Pfam	PF02183	1.4E-14	134	172	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MLSRGTGTMA FLPAGPESSV DFRSHEDNDL TSTFPSVFPS SCAPPHQDFH ERCDDHHQDS 60 RADHDEMSDD GSSHLLGEKK RRLNLEQVKA LERSFELGNK LEPERKIQLA RALGLQPRQI 120 AIWFQNRRAR CKTKQLEKDY DILKRQYDKL KVDNDALKSQ NKKLHSELQL LTLGNKESAA 180 DGTPILFNLN KENEGSNWNN NGSVDDNSTV IDVNLGTTTR TSSTNSPLNN HDVFPTTYKI 240 DQTTVPEEGF CNMFTTVEDQ TNYWPLPVQQ HFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	134	RRARCKTKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016490250.1	1e-138	PREDICTED: homeobox-leucine zipper protein HAT7-like isoform X1
Refseq	XP_019258561.1	1e-138	PREDICTED: homeobox-leucine zipper protein HAT7-like isoform X1
Swissprot	Q00466	1e-63	HAT7_ARATH; Homeobox-leucine zipper protein HAT7
TrEMBL	A0A1S4BN14	1e-137	A0A1S4BN14_TOBAC; homeobox-leucine zipper protein HAT7-like isoform X1
TrEMBL	A0A314LFK7	1e-137	A0A314LFK7_NICAT; Homeobox-leucine zipper protein hat7
STRING	XP_009775432.1	1e-137	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA848	24	98

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	4e-61	homeobox 3