PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00961g10016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 385aa    MW: 42868.8 Da    PI: 7.1589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00961g10016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000522482861255
                               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Peinf101Scf00961g10016.1 248 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 286
                               6677889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.553236285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.88E-6246290No hitNo description
SuperFamilySSF474595.63E-10246296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-7250292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MNRGHVMQKS PVQQMMGGSP NWWNMINNMR PPIISHHHQQ ETAAHHHVPS NFLAPNNNLV  60
PHFSTPTVPP SSSSLHDMSS TTNSWNDHNQ DQLPESWSQL LLGGLVGEED KSSILSNMQQ  120
VKKLENNWEE QFLSQASNDS VVDIKQKNLL VANSYMYEHG NNMDSFHQQT ELAAKPTWSQ  180
MMPGPVSSPK SCVTTLSSNM LDFSNKKSDA RHPPPDHSSE CNSRVTGGAP NKKARVQPST  240
TQSTFKVRKE KLGDRITALH QLVSPFGKTD TASVLLEAIG YIRFLQSQIE ALSLPYLGSG  300
SGNMRHQHQQ QSVQERNSLF PEDPGQLSND NCLKRKITSE EDYHEEPKKD LRSRGLCLVP  360
LSCTLQVGSD NGADYWAPAL GGGFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229487.10.0PREDICTED: transcription factor bHLH68-like
SwissprotQ8S3D13e-98BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A314KLJ70.0A0A314KLJ7_NICAT; Transcription factor bhlh68
STRINGXP_009777548.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15192247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-96bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]