PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00930g09018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 329aa    MW: 37043.6 Da    PI: 8.5852
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00930g09018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-09177224455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peinf101Scf00930g09018.1 177 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 224
                               8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.8E-17171242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.37E-8171228No hitNo description
PROSITE profilePS5088815.11173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-18173241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.8E-7177224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-9179229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009299Biological ProcessmRNA transcription
GO:0009735Biological Processresponse to cytokinin
GO:0009826Biological Processunidimensional cell growth
GO:0043425Molecular FunctionbHLH transcription factor binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MSVLERQRAV LERLYDQSKH QLSSLPQQHL VHFNNLMTGN MMGCLEVPID EQKLNQNFTN  60
FNTFGTQNNC QEMARPSFST VSNSSVTTGS KGQDQSTIVA SRENAVSTKK RKAEFSEEED  120
CKTKRHEGKA GEVKSEITEK SQRGASGNSS KENSKTSEVQ KPDYIHVRAR RGQATDSHSL  180
AERARREKIS KKMKYLQDLV PGCNKVTGKA GMLDEIINYV QSLQKQVEFL SMKLAALNPQ  240
LHLNTDSFFT KDFSNCMANF PTVAMPTLTE YNIIQQQQGS SGVAQMLHQR RENNLMSFQE  300
SSLGSSHTTV VQQQPTFETD LQSLFQCQL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00106PBMTransfer from AT2G18300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019239122.11e-168PREDICTED: transcription factor HBI1-like
TrEMBLA0A2G2XB171e-167A0A2G2XB17_CAPBA; Transcription factor HBI1
STRINGXP_009592416.11e-165(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.21e-57bHLH family protein