PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00889g05003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family CAMTA
Protein Properties Length: 994aa    MW: 110943 Da    PI: 6.297
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00889g05003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1139.78.6e-446315821116
                      CG-1  21 fekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeee 105
                               ++++ +++++    + gsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ e+l+cyYah+++np+fqrr+yw+L+ +
  Peinf101Scf00889g05003.1  63 LSSFFISSDKVVVSTGGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGDQNPNFQRRSYWMLDPA 147
                               4567777788888999********************************************************************* PP

                      CG-1 106 lekivlvhyle 116
                               +++ivlvhy++
  Peinf101Scf00889g05003.1 148 YDHIVLVHYRD 158
                               *********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143773.6788165IPR005559CG-1 DNA-binding domain
SMARTSM010766.9E-6311160IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-3666158IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.2E-10422509IPR013783Immunoglobulin-like fold
SuperFamilySSF812966.3E-19425509IPR014756Immunoglobulin E-set
PfamPF018331.0E-9425508IPR002909IPT domain
CDDcd001023.42E-5425509No hitNo description
PROSITE profilePS5029714.159623715IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.208.9E-14623717IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.18E-14627717IPR020683Ankyrin repeat-containing domain
CDDcd002043.60E-12643715No hitNo description
PfamPF127962.9E-6644716IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0038656685IPR002110Ankyrin repeat
PROSITE profilePS5008811.06656688IPR002110Ankyrin repeat
SMARTSM0001515773795IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.419774802IPR000048IQ motif, EF-hand binding site
SMARTSM000150.82833855IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.73834863IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.02E-5834881IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.015836854IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0056856878IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.791858882IPR000048IQ motif, EF-hand binding site
PfamPF006126.2E-5859878IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 994 aa     Download sequence    Send to blast
MAESGYDIND LVREAQIRWL KPAEVLFILQ NHENHQLSSE PPQKPPSSFL TTLLHWNHVV  60
KLLSSFFISS DKVVVSTGGS LFLFNKRVLR FFRKDGHSWR KKKDGRTVGE AHERLKVGNA  120
ETLNCYYAHG DQNPNFQRRS YWMLDPAYDH IVLVHYRDIT EGRHNPAFMS ESSPISSILS  180
PSPSSYSTQQ TGSTVVASES YEQYQNQCSP GEICSDAVIN SNGMSDIRGR TEASNSPGLE  240
MSQALRRLEE QLSLNDDSLK EIDPLYADAL NDDSSLIQMQ GNSNSLLLQS HSGESSESHH  300
RHVSQDGHIW KDMPDHYGVS AAAESQPKYL HKLDENGMLQ TLSDRGTVEA YEGYKWQNLS  360
EKEAQKAPSP AFKQFEDFNY PTYPPGINTF GSDADQFTTI FDQGQIGTSL EDEMSFTIAQ  420
KQKFTIRDIS PDWGYSSEAT KVVIIGSFLC NPSECMWTCM FGDSEVPVQI IQEGVICCQA  480
PPHLPGKVTL CVTSGNRESC SEVREFEYRL KPDDCARDNQ PDISAYKSSE ELLLLVRFVQ  540
MLLSDLSVQK GDSSELGNDF LEKSKASEDS WAQVIESLLF GTSTSTITID WLLQELLKDK  600
FQQWLSCKLQ QKDNQMGCSL SRKEQGIIHM VSGLGFEWAL HPILNAGVSV NFRDINGWTA  660
LHWAARFGRE KMVASLIASG ASAGAVTDPS SRDPVGKTAA SIASSCGHKG LAGYLSEVAL  720
TSHLSSLTLE QSELSKGTAD VEAEKTISSI SNTSATTNED QRSLKDTLAA VRNAAQAAAR  780
IQSAFRAHSF RKRQQKEAGV ASVMGGDEYG ILSNDIHGLV AASKLAFRSN TRDHNSAALA  840
IQKKYRGWKG RKDFLAFRQK VVKIQAHVRG YQVRKQYKVC WAVGILEKVV LRWRRRGVGL  900
RGFRHDTELI DESEDEDILK VFRKQKVDAA LDEAVSRVLS MVESPGARQQ YHRILQKYRQ  960
AKAELEGVDS ETASTAHGDM SNMENDDIYQ FPSY
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN5660480.0JN566048.1 Solanum lycopersicum calmodulin-binding transcription factor SR2L mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617256.10.0PREDICTED: calmodulin-binding transcription activator 4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A344X3880.0A0A344X388_NICTO; Calmodulin-binding transcription activator 3
STRINGXP_009617256.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]