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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00883g05010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
SBP |
Protein Properties |
Length: 304aa MW: 34546.8 Da PI: 8.5111 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00883g05010.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 131 | 4.2e-41 | 173 | 250 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
+Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+
Peinf101Scf00883g05010.1 173 RCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKNQQ 250
6**************************************************************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MLDYDWGEQT SVMLSGEEQN QENDQNRQFF HDPFVNNTPQ TFAHDQNTSL MNTHHHFPTT 60 HQQQNQQFFH TPNNTHHHLT NTLYDPRAYE TSYTHPPTQG TLPTMHHGFM VVPKSEPQFV 120 GTGIDHFGGS SSSRIGLNLG GRTYFSSSED DFVNRLYRRT RAVEAAGSVN TPRCQAEGCN 180 ADLTHAKHYH RRHKVCEFHS KAATVIAAGL TQRFCQQCSR FHLLSEFDNG KRSCRKRLAD 240 HNRRRRKNQQ ANLENSNKTQ VESTRNSSSD SLARSPPDSG AHSSSVTVAI SPPTISLDCF 300 RQRP
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Functional Description ? help
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Source |
Description |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Binds specifically to the 5'-GTAC-3' core sequence. Involved in development and floral organogenesis. Required for ovule differentiation, pollen production, filament elongation, seed formation and siliques elongation. Also seems to play a role in the formation of trichomes on sepals. May positively modulate gibberellin (GA) signaling in flower. {ECO:0000269|PubMed:12671094, ECO:0000269|PubMed:16095614, ECO:0000269|PubMed:17093870}. |