PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00871g02012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | MYB_related | ||||||||
Protein Properties | Length: 821aa MW: 90630.6 Da PI: 7.2516 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.7 | 6.3e-09 | 85 | 127 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e++ a +q G++ +++I ++++ + q++++++ + Peinf101Scf00871g02012.1 85 AWTRQEEERFFSALRQVGKN-FERITSRVQ-SKNKDQVRHYYYRL 127 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.36E-10 | 80 | 132 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 13.122 | 81 | 132 | IPR017884 | SANT domain |
SMART | SM00717 | 1.1E-6 | 82 | 130 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 8.2E-6 | 84 | 130 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.1E-6 | 85 | 127 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 4.64E-6 | 85 | 128 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 821 aa Download sequence Send to blast |
MQIEPRASLE CETSLHPETF MCKDGSSGFT QEPVAAQLVI PSKGHPASQQ SVPTHDHVVT 60 QQVPSSQDQV TLQQPAKRQT RQWAAWTRQE EERFFSALRQ VGKNFERITS RVQSKNKDQV 120 RHYYYRLVRR MNKLLGPELS LDAKNSKDTN AAMLRWWSLL EKSSCKASQL HLKPRRFKIF 180 IETLESQLLK DRKKKIRRRP SQGESSSVAA ESLSSHSRVS THDSQAVKVV LLDNQDIQKF 240 GSGKGSSLKR HVTMGVNRRN AKVDSSPVKN ARHRRRIGSA SKAAFKKWEK AAIAGVSLVA 300 DAAEHLERAT IDKDVGLVQN LQGLNCFEHV GKDVHSLPTL SQNLFNETNI QSCMKLKLQL 360 FPVDEGTRRA LEMDNHNPYL ELTLSNRKKM SSVLEHLNRK WGSSSIATGE LVLFPYHVSM 420 ENLVQSLRWT KDTTLSAADV YNLIGSPPVF RLRYGWFPNA ELGTSRAPLS SITPLTQNTN 480 TNITEEKNAE VLTSANGKLV HFAKEPLVSN PRTTMTSSSI ELSGESNFQV SMGLNTHCSG 540 HDETLPSHRR ENGAATAGKQ VEVHDMLGNK ASALLAGGWE DSITISIGDL LSDAPDDEEA 600 NGIDSTLPGS STFFQQNPFS CDSFDAAIAA HIYKHRSKAD SQMVLPPQSS SIWNAEDTCD 660 AFSFLKDLGS SDKARSPSSN VCGENWQQIA RSSSLVLDAG VKDLPGNVEP LIDEAAHIDP 720 TDECQSNARA LDGSSKELNE LSDIYWSDSL GPLELDAPSC RYHNEDLILG DSRGCLNRLI 780 ASSLDAFQNC SFFGVDKKEP GSTAEALEAS SFSDCKIGAK V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 190 | 199 | DRKKKIRRRP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009610182.1 | 0.0 | PREDICTED: TSL-kinase interacting protein 1 isoform X1 | ||||
Refseq | XP_009610183.1 | 0.0 | PREDICTED: TSL-kinase interacting protein 1 isoform X1 | ||||
Refseq | XP_018628864.1 | 0.0 | PREDICTED: TSL-kinase interacting protein 1 isoform X1 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A1S3Z842 | 0.0 | A0A1S3Z842_TOBAC; TSL-kinase interacting protein 1-like isoform X1 | ||||
STRING | XP_009610182.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8640 | 17 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.3 | 0.0 | TSL-kinase interacting protein 1 |