PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00835g07014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 515aa    MW: 58284.1 Da    PI: 6.3518
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00835g07014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.42.4e-31237291155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k+r+rWt++LH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR 
  Peinf101Scf00835g07014.1 237 KTRIRWTQDLHDRFVECVTRLGGADKATPKAILKLMESEGLTIFHVKSHLQKYRN 291
                               68****************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.679234294IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.4E-28235292IPR009057Homeodomain-like
SuperFamilySSF466894.3E-16236291IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-24237292IPR006447Myb domain, plants
PfamPF002491.2E-7241290IPR001005SANT/Myb domain
PfamPF143792.4E-21321368IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
PfamPF143791.3E-12430475IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MSIQREILQQ NYKFASDYTI ERAAMHVPKQ SSSYMGFSLP PATSVEEVCE QQQQQQQSFL  60
PNANSSSSNS TIIGRIGSPS SAFFATERYL GLTQYDDHQD NCFQLSKNYD FEVQSSYPQQ  120
QCGNGFLADS QAEALPDFHP KISLPPFIRS QFSTSQPFSP FSSLSEKERI MHLKRKLLGE  180
FDSASIPCDV NQDCSLSHNL CGNHLAHMMQ QSAGMPSGCP SASSNNSASS GGSLSNKTRI  240
RWTQDLHDRF VECVTRLGGA DKATPKAILK LMESEGLTIF HVKSHLQKYR NAKYIPEPIE  300
GKSEKRNSPN NVTQIDSKTG IQIKEALQMQ LEVQRRLHEQ LEIQRKLQLR IEEQGKQLKM  360
IFDHQQKTTR SLLDTQNSSP GDDPSTGLYD DIEIMVAECS DNTNFPSKIS ESEKRDSPSN  420
VTQIDNKTGM QIKEALQMQL DAQRLMHEEL ERKLQLRIEE QSKRLKMIFD QQQKTNWSLL  480
EAQNSSISSR GNYPSTQHDE IESFVAERSE NAHLP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-21237294259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603787.20.0PREDICTED: myb family transcription factor PHL5-like
TrEMBLA0A1J6J5C80.0A0A1J6J5C8_NICAT; Myb family transcription factor phl5
STRINGXP_009603787.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-67G2-like family protein