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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00835g06019.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
SBP |
Protein Properties |
Length: 403aa MW: 42981.5 Da PI: 9.3347 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00835g06019.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 131.4 | 3.2e-41 | 71 | 142 | 5 | 76 |
TT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
SBP 5 egCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76
gCeadls++k y++rhkvC +hsk+pvv+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+
Peinf101Scf00835g06019.1 71 SGCEADLSDVKAYYSRHKVCATHSKSPVVIVAGIEQRFCQQCSRFHRLPEFDDGKRSCRRRLAGHNERRRKP 142
58********************************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MNGLSNSEME SASSISGNSS SSPDSPPTGL KFGQKIYFEH VGLGVHNKSP SGSSSPVTGA 60 PAPASKKGRG SGCEADLSDV KAYYSRHKVC ATHSKSPVVI VAGIEQRFCQ QCSRFHRLPE 120 FDDGKRSCRR RLAGHNERRR KPPPGSLLST RYGSLSSSIF GGTPLHFPLL ALRLHNSLSI 180 SLALLLHADR GYINTALTEN NSRSGSFLVD FTAYPNLTEG AWPNTRSSER GWDKTTASGK 240 YLQSPWLNSS ENPTSELVLQ GSAARATSFS GPGIPSRNCF TGVSDSGGAL SLLSNESWGS 300 RNQPSGLGVN SLVNTDGGHT VQPSGSHAAP INFSGPLWGF KGNEASSTSH DMPRNLGLGQ 360 LSHHAVNQYS AELGMPQPSG RQYLDLEHSK GYDSSVQNVH WTL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | LC073299 | 0.0 | LC073299.1 Nicotiana tabacum NtabSPL9b mRNA for squamosa promoter binding protein NtabSPL9b, complete cds. |