PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00835g05020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 499aa    MW: 55975.9 Da    PI: 6.9901
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00835g05020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.7e-11208244541
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                               k  rr+++NReAAr+sR+RKka++++Le     L++ 
  Peinf101Scf00835g05020.1 208 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQL 244
                               7789***********************9855555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-8201250No hitNo description
SMARTSM003381.4E-7204266IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266206250IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-7208251No hitNo description
CDDcd147082.06E-22208260No hitNo description
PfamPF001706.1E-8208246IPR004827Basic-leucine zipper domain
PROSITE patternPS000360211226IPR004827Basic-leucine zipper domain
PfamPF141449.8E-32299373IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MGFERAAFVE SSSPEQENNK LFVDMMDSPN NNQISFGGQH QHQQQFFHVA HHQQQQNNQI  60
SFGMMQQQSS STIPGSLISK DSAGAYDLGE LDQALFQYLD GQDPSSIQEQ QRQNSGMRPP  120
TLNIFPSQPM HVEPSSTKGN NTGIVSPAIS GSKRSSQPSM ELSNPKNNDV ASASVGPEPP  180
KSAKREGNRK GPTSSSEQDN APKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIR  240
LTQLEQELQR ARSQGYYLSG GALLGGDQSL PVNMGNISSD AAVFDMEYAR WLEEHHRLMC  300
ELRNAVQEHF PENELRIYVE NCVAHYDEIM NLKSMLAKSD VFHLVSGLWK TPAERCFMWM  360
GGFRPSELLK IILSQIEPLT EQQLMGICGL QQSTQEAEDA LSQGLEALNH SLSDTIASDA  420
LACPQNMANY MGQMALAMNK LSTLEGFVRQ ADNLRHQTIH RLHQLLTTRQ AARCFLAIAE  480
YFHRLRALSS LWLARPRHE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY9980180.0AY998018.1 Nicotiana tabacum TGA10 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611363.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S3YPP90.0A0A1S3YPP9_TOBAC; transcription factor HBP-1b(C38)-like isoform X1
STRINGXP_009611363.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-179bZIP family protein