PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00830g03007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TCP
Protein Properties Length: 299aa    MW: 33584.3 Da    PI: 6.7088
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00830g03007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.43.2e-3521118266
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................... 65 
                               + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++                     
  Peinf101Scf00830g03007.1  21 TSRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDMQDRLGYDRPSKAVDWLINKAKNAIDKLAELppwnpnddgvvnnmptsaead 105
                               679*************************************************************888877777776554444444 PP

                       TCP  66 ............s 66 
                                           +
  Peinf101Scf00830g03007.1 106 vnssvyalepqpP 118
                               4444444332221 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.9E-3221150IPR005333Transcription factor, TCP
PROSITE profilePS5136932.8862381IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MKRATGEEIV QVEGGHILRS TSRKDRHSKV YTAKGPRDRR VRLSAHTAIQ FYDMQDRLGY  60
DRPSKAVDWL INKAKNAIDK LAELPPWNPN DDGVVNNMPT SAEADVNSSV YALEPQPPSD  120
SSSRFLFQRQ LAENPSSISS SYMMLAPAAE TQSVPDTSKL FFPMNSGTSL MNFLSFPHEV  180
MSRESIQIED LGLSLHSNSH DQNSNHRTSN TDQSPFSNPN PVSFEATYPR MTNWILLHQQ  240
LFSQGGALFS HREPLQSNFS QLIHACEQRP MAGAHHQSSI FNESFQFPTR IHGEVENGV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A2e-222881154Putative transcription factor PCF6
5zkt_B2e-222881154Putative transcription factor PCF6
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019249153.11e-138PREDICTED: transcription factor TCP4-like
TrEMBLA0A4D6FEA30.0A0A4D6FEA3_PETHY; TCP12
STRINGXP_009624544.11e-133(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.33e-53TCP family protein