PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00797g12001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 261aa    MW: 29451.8 Da    PI: 6.6783
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00797g12001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.43.8e-144085247
                              SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                              ++WT++E+ l++++ k +G+g W++I++    +Rt+ q+ s+ qky
  Peinf101Scf00797g12001.1 40 NPWTEDEHRLFLRGMKIHGKGKWTKISKDCLPNRTPQQIASHAQKY 85
                              69*************************96555*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.2793490IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.1E-133486IPR009057Homeodomain-like
SuperFamilySSF466893.16E-153690IPR009057Homeodomain-like
TIGRFAMsTIGR015574.9E-123788IPR006447Myb domain, plants
SMARTSM007179.4E-113888IPR001005SANT/Myb domain
PfamPF002497.0E-124085IPR001005SANT/Myb domain
CDDcd001672.59E-124186No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MGRASMCSEK SKKIKLFGVT ISTTDTTNSE NYGQKIKKSN PWTEDEHRLF LRGMKIHGKG  60
KWTKISKDCL PNRTPQQIAS HAQKYFIRLT ETNERRRRNK PSVFDVNLEN TSPEEISEEN  120
SNVVFEHAIV PFKNQEHYDN TVSLENQEHD DANIVQLENQ EHDANTVPLK NQEQREDHQE  180
TASALLVTPI AAIPTETSQH PSFLIPSYSV VQLSAVGGTR VVLPVTWVQM YNSHNGINYG  240
TLVQQPLSGV SSYCSSDLTL G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74541230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.21e-19MYB_related family protein