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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf00791g12003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 190aa MW: 21921.2 Da PI: 4.5172 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00791g12003.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 109.5 | 3.9e-34 | 8 | 122 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrF Ptdeelvv++L++k++ +++ +vi+++d+y ++PwdL+ ++wyf+s+r + +r+t +gyWk
Peinf101Scf00791g12003.1 8 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLD------GNKWYFYSRRTQ--------SRITGNGYWKP 77
79*************************999.99**************6......689*****9854........799******** PP
NAM 86 tgkd.kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
g d ++++s+ ++ +vg+kk +fy g+ p+g++t+Wvm+ey+l
Peinf101Scf00791g12003.1 78 LGVDnEPIYSSsSSDKVGMKKYYAFYIGEPPEGVETNWVMQEYSL 122
**96156877667788***************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010089 | Biological Process | xylem development |
| GO:0043067 | Biological Process | regulation of programmed cell death |
| GO:0048367 | Biological Process | shoot system development |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLDGNKWYF 60
YSRRTQSRIT GNGYWKPLGV DNEPIYSSSS SDKVGMKKYY AFYIGEPPEG VETNWVMQEY 120
SLSDSSSTSG TSRSSSRRRS SRSKIDYSKW VICRVYERNC DNDNDDGTEL SCLDEVFLSL 180
DDLDEISLPH
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-36 | 4 | 159 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-36 | 4 | 159 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-36 | 4 | 159 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-36 | 4 | 159 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-36 | 4 | 159 | 16 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-36 | 4 | 159 | 13 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-36 | 4 | 159 | 13 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death. {ECO:0000269|PubMed:18069942, ECO:0000269|PubMed:20458494}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 3e-45 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
