PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00784g00041.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 359aa MW: 41522.7 Da PI: 8.2806

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00784g00041.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.8	3.1e-21	19	153	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratks 80 p+GfrFhP+d e++ +yL v++++l+l++ ++ +d+y ePw++ ++ ++ +++ yf ++ +k++a+ r +r++ + Peinf101Scf00784g00041.1 19 PMGFRFHPKDMEVM-KYLLGFVTNNPLPLQDElMQFADLYADkEPWQIFHASNSheciNKNTRYFITQLKKEKANWIRFSRTVGK 102 89********99.9*******99988757777997559**642222223355677****************** PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 g+W+ + + ke+ ++kg+l+gl k+L + k+++ + ++ +W+m ey+l Peinf101Scf00784g00041.1 103 GTWRLQDSGKELRDTKGRLMGLVKSLKYTpnnKNNKGNNNNGEWLMREYSL 153 *************************75545555566889****97 PP
2	NAM	27.9	6.5e-09	178	243	67	128
NAM 67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128 ++ +k+ +r++ +g+Wk + + kev +++g+lvg k+L + + ++++ + ++W+m ey+l Peinf101Scf00784g00041.1 178 VKPDKKNVSRTVGRGTWKPQDSGKEVRDTNGTLVGFVKSLKYIpckkSSSTNNNNYAEWLMREYSL 243 456788899999*****************************87654566677799*****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.09E-22	5	160	IPR003441	NAC domain
PROSITE profile	PS51005	22.927	18	175	IPR003441	NAC domain
Pfam	PF02365	4.9E-12	19	153	IPR003441	NAC domain
SuperFamily	SSF101941	2.35E-9	179	248	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
YTARMMKSHR QTKRSSRWPM GFRFHPKDME VMKYLLGFVT NNPLPLQDEL MQFADLYADK 60 EPWQIFHASN SHECINKNTR YFITQLKKEK ANWIRFSRTV GKGTWRLQDS GKELRDTKGR 120 LMGLVKSLKY TPNNKNNKGN NNNGEWLMRE YSLADNYLNA PQIKNKGFMT ASTRTLKVKP 180 DKKNVSRTVG RGTWKPQDSG KEVRDTNGTL VGFVKSLKYI PCKKSSSTNN NNYAEWLMRE 240 YSLADKIKKK EKKGNNIQEV NNDGDVEDDV QEYINSVLEE DHVQEDVNGQ SNDTLLLADH 300 IEEKNNNEYY CMHMIEVDDT VSVFDLLGSG DQVQIQDHPL PSEWGSADDV DLKTLLDCL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

YTARMMKSHR QTKRSSRWPM GFRFHPKDME VMKYLLGFVT NNPLPLQDEL MQFADLYADK  60
EPWQIFHASN SHECINKNTR YFITQLKKEK ANWIRFSRTV GKGTWRLQDS GKELRDTKGR  120
LMGLVKSLKY TPNNKNNKGN NNNGEWLMRE YSLADNYLNA PQIKNKGFMT ASTRTLKVKP  180
DKKNVSRTVG RGTWKPQDSG KEVRDTNGTL VGFVKSLKYI PCKKSSSTNN NNYAEWLMRE  240
YSLADKIKKK EKKGNNIQEV NNDGDVEDDV QEYINSVLEE DHVQEDVNGQ SNDTLLLADH  300
IEEKNNNEYY CMHMIEVDDT VSVFDLLGSG DQVQIQDHPL PSEWGSADDV DLKTLLDCL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1024	13	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-10	NAC domain containing protein 2