PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00777g02007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 233aa    MW: 27002.6 Da    PI: 8.46
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00777g02007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.55.2e-1455139390
                      FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                                n+YA    F vrk +++++ rn+e t+  f  s++g+++  +++ e++ r+  e r+gCka+++ k + +g wev ++  eHnH
  Peinf101Scf00777g02007.1  55 HNSYAVAKDFGVRKGAKTYN-RNKELTRCLFLYSCKGQSHLCSNS-EERIRQMLEYRCGCKARIRFKIS-NGMWEVFEFCDEHNH 136
                               699*************9998.77789**************99999.99999****************99.*************** PP

                      FAR1  88 ela 90 
                               +++
  Peinf101Scf00777g02007.1 137 PMV 139
                               997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.7E-1155139IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MEPSLAANKT PNNKDNNIND QEYDKSVHTL SNTKNEFALK IEIKFSSENE SYETHNSYAV  60
AKDFGVRKGA KTYNRNKELT RCLFLYSCKG QSHLCSNSEE RIRQMLEYRC GCKARIRFKI  120
SNGMWEVFEF CDEHNHPMVE ENLRYFIPSG RKLIYATKNI LSSMVGAGIR TKIVVRYLQN  180
EASGIKNVGF IEQDAHNFIQ ARKRNMIDSG DAQTLVNQLF FYLFQVDEDG RMC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016467903.11e-107PREDICTED: putative protein FAR1-RELATED SEQUENCE 10
TrEMBLA0A1S3ZUA71e-106A0A1S3ZUA7_TOBAC; Uncharacterized protein
STRINGXP_009771804.11e-105(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-13FAR1-related sequence 10