PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00750g01017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | AP2 | ||||||||
Protein Properties | Length: 524aa MW: 56925.4 Da PI: 6.5195 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.7 | 4.3e-11 | 162 | 218 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g Peinf101Scf00750g01017.1 162 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 218 57*******************5444.2455535555.7799999*************98 PP | |||||||
2 | AP2 | 47.2 | 5.5e-15 | 261 | 312 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Peinf101Scf00750g01017.1 261 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 312 57****************988532...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.37E-14 | 162 | 228 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.02E-18 | 162 | 228 | No hit | No description |
Pfam | PF00847 | 1.1E-8 | 162 | 218 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-22 | 163 | 232 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-11 | 163 | 227 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.174 | 163 | 226 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-6 | 164 | 175 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-18 | 261 | 322 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 6.8E-10 | 261 | 312 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.37E-25 | 261 | 322 | No hit | No description |
SMART | SM00380 | 7.9E-34 | 262 | 326 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.2E-18 | 262 | 320 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.045 | 262 | 320 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-6 | 302 | 322 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009845 | Biological Process | seed germination | ||||
GO:0040019 | Biological Process | positive regulation of embryonic development | ||||
GO:0048364 | Biological Process | root development | ||||
GO:0060772 | Biological Process | leaf phyllotactic patterning | ||||
GO:0060774 | Biological Process | auxin mediated signaling pathway involved in phyllotactic patterning | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence Send to blast |
MDNMDSSSNS ENWLGFSLSN INTNSSTSNH LPSNSSELCL FQAAAFNSNP NTSRVVRPEE 60 TGVSGGAEPK LEDFLGGSVP SGSTASAEVC LFAGEITPSP TTTTTTTTSC EYGSELKTIA 120 ASFLRSFAAD HQNDTQKQLA VVAQPPETPT KKAVDTFGQR TSIYRGVTRH RWTGRYEAHL 180 WDNSCRREGQ SRKGRQGGYD KEDKAARAYD LAALKYWGPT TTTNFPVSNY EKELVEMKNM 240 SRQEFVASLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA 300 EAYDIAAIKF RGLNAVTNFD ISRYDVKSIA SSNLPVGGMN NKSKTSSESA SESSKNVEGN 360 RTDDRDLSSA TSAPFSFQAP TMVNLGFGLP VKQDATDFWS ILGYTNDQNN NGKNSSVNSM 420 FYNGSPTGTT SHAQGTTLVS MNEVNNSNVM FNEEGYYQQQ EGACCSTISS VPSEISMGLN 480 SNNATTTLDG SSTFGNWIPN PLLSFQSTTK SSLAPFQTPI FGME |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size. {ECO:0000250, ECO:0000269|PubMed:15988559}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009770282.1 | 0.0 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL5 isoform X2 | ||||
Swissprot | Q6PQQ3 | 1e-144 | AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5 | ||||
TrEMBL | A0A1U7VQU8 | 0.0 | A0A1U7VQU8_NICSY; AP2-like ethylene-responsive transcription factor AIL5 isoform X2 | ||||
STRING | XP_009770281.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2246 | 24 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-134 | AINTEGUMENTA-like 5 |
Publications ? help Back to Top | |||
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