PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00746g02002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 315aa    MW: 34974.6 Da    PI: 5.9299
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00746g02002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1177.6e-371469661
                    zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                               +cprC s ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk+++ 
  Peinf101Scf00746g02002.1 14 PTCPRCGSINTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRG 69
                              57**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-23659IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.4811468IPR003851Zinc finger, Dof-type
PfamPF027011.6E-311568IPR003851Zinc finger, Dof-type
PROSITE patternPS0136101652IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MERGIWKPNV ELAPTCPRCG SINTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG  60
GGCRKSRRGK SSLNIRSSTD HGFISRNNLA RGIGLNNNPS IDQSTNSLSQ GGDHHHQGPS  120
IDLALVYSNF LNSSKPQPED HQLQQLELPE LLPNDHQLAV GPSFEFSGMI NMDFTSTLGQ  180
ETQLSEGDAV YFSAIDGIEK HQTTMQHIIN HNDHDQYTNM NMNTNINHEL GNYMQLPPLP  240
GEEGVSEGMV WSNSHDHMIF PNDILNTSQL SGGGLEPAEL PAEPEEAQDP SHHHCVNADD  300
GSLFSLSNIG NIFRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00405DAPTransfer from AT3G52440Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2458179e-65AC245817.9 Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-126l2 map 1, complete sequence.
GenBankHG9754409e-65HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009601936.11e-137PREDICTED: cyclic dof factor 5-like
RefseqXP_019226105.11e-137PREDICTED: dof zinc finger protein DOF4.7-like
TrEMBLA0A314KSC41e-136A0A314KSC4_NICAT; Dof zinc finger protein dof3.5
STRINGXP_009601936.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129631317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.13e-36Dof family protein