PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00723g01015.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 970aa MW: 110469 Da PI: 8.8113

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00723g01015.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	69	6.6e-22	300	349	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+d + y +lpi+ AAke+++c+Tv+K+ CR+ G++RWP+Rkiks+ Peinf101Scf00723g01015.1 300 GKLRLKDFADYLHLPIELAAKEMNICPTVMKKVCRRDGLSRWPYRKIKSI 349 6899********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.608	289	369	IPR003035	RWP-RK domain
Pfam	PF02042	4.6E-19	302	349	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 970 aa Download sequence Send to blast
MDYTTPTAIV PYHDPFDDSC YVGQISLVDE NPTIGLPISS WNQQPFSSDP TIVKSDNDFV 60 GDVDVYDPFV DPMLLDIPYE CTNNYLVENS TYNADEAGVF GTNCSVSQDG VCGNLSHVTV 120 WPVSTSPSMC NNCQILREIT LSNGLQTCKL VIYGTLGMIS HAVIEKYSMD FSSQSHESSQ 180 IFEYGVSSFY TPLFRPLLLY LMIFNDGTSS VKQFLVQYFE TCKHEGYILL QDPLWNFYEA 240 LGVGYDDDDN LDIDSLLQLS PTTLRDCQMD QQEMKNESEA NGNDVRHGKI PLSAQRERTG 300 KLRLKDFADY LHLPIELAAK EMNICPTVMK KVCRRDGLSR WPYRKIKSIK RKISKREKSL 360 SSNDVEERAS AKADIGKLEE ELAKIFEAFR VNQYWIYMKL FWLIKKYYCS IFEKRKKKKK 420 MANFEKVVGV KKVRQKDPDG WDVTMPLPGD IIEGIGELAA DDDSFVQAKA WSELTLFLGK 480 IVGHFIWLKV RRGESTLKLR GYILVERRSN LQKRFVVRAA SDERHLAVIA ELTLGRCTEL 540 QEMSRRMVNS GSRGYNQMGL QYDWKTKVGT YLPDSRSTVV SSILFMPLTR EYRVEATIVR 600 TMAWFSAAVS SGIPLIFDRR NNSGKDLTWG SYVGNQSVQG VRLWYLPGMT EVPLELTPAP 660 GETRFGIDIR RTDEGFVSIY SVTKGTAADR AGLGHLYEQA NKTEQLLVIS RLEGKSLLPS 720 TVSPEGLIYC CDHGDIKETL NLAVERSETS FPIGSSSALW FMYQSPAPPP IHYTYPSPGP 780 RHHHKHKCPP PPPSYTYYKT PPPPPPIYWY KSPPPPSPIY KYKSPPPPPP FYMYKSPPPP 840 SPIYTYKSPP PPPSPVYKYK SPPPPPPSPV YKYKSPPPPP SPVYKYKSPP PPPPVYKFPP 900 PPPLIYMYKS PPPPPPPYYH YVSPPPPPKH HHHHRHHHHH HHHKKPKWSP YPYIYYKSPP 960 PPPKHYLPPV

Sequence ? help Back to Top

Protein Sequence Length: 970 aa Download sequence Send to blast

MDYTTPTAIV PYHDPFDDSC YVGQISLVDE NPTIGLPISS WNQQPFSSDP TIVKSDNDFV  60
GDVDVYDPFV DPMLLDIPYE CTNNYLVENS TYNADEAGVF GTNCSVSQDG VCGNLSHVTV  120
WPVSTSPSMC NNCQILREIT LSNGLQTCKL VIYGTLGMIS HAVIEKYSMD FSSQSHESSQ  180
IFEYGVSSFY TPLFRPLLLY LMIFNDGTSS VKQFLVQYFE TCKHEGYILL QDPLWNFYEA  240
LGVGYDDDDN LDIDSLLQLS PTTLRDCQMD QQEMKNESEA NGNDVRHGKI PLSAQRERTG  300
KLRLKDFADY LHLPIELAAK EMNICPTVMK KVCRRDGLSR WPYRKIKSIK RKISKREKSL  360
SSNDVEERAS AKADIGKLEE ELAKIFEAFR VNQYWIYMKL FWLIKKYYCS IFEKRKKKKK  420
MANFEKVVGV KKVRQKDPDG WDVTMPLPGD IIEGIGELAA DDDSFVQAKA WSELTLFLGK  480
IVGHFIWLKV RRGESTLKLR GYILVERRSN LQKRFVVRAA SDERHLAVIA ELTLGRCTEL  540
QEMSRRMVNS GSRGYNQMGL QYDWKTKVGT YLPDSRSTVV SSILFMPLTR EYRVEATIVR  600
TMAWFSAAVS SGIPLIFDRR NNSGKDLTWG SYVGNQSVQG VRLWYLPGMT EVPLELTPAP  660
GETRFGIDIR RTDEGFVSIY SVTKGTAADR AGLGHLYEQA NKTEQLLVIS RLEGKSLLPS  720
TVSPEGLIYC CDHGDIKETL NLAVERSETS FPIGSSSALW FMYQSPAPPP IHYTYPSPGP  780
RHHHKHKCPP PPPSYTYYKT PPPPPPIYWY KSPPPPSPIY KYKSPPPPPP FYMYKSPPPP  840
SPIYTYKSPP PPPSPVYKYK SPPPPPPSPV YKYKSPPPPP SPVYKYKSPP PPPPVYKFPP  900
PPPLIYMYKS PPPPPPPYYH YVSPPPPPKH HHHHRHHHHH HHHKKPKWSP YPYIYYKSPP  960
PPPKHYLPPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	413	419	KRKKKKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP009518	1e-139	AP009518.1 Solanum lycopersicum DNA, chromosome 8, clone: C08HBa0067I16, complete sequence.
GenBank	HG975520	1e-139	HG975520.1 Solanum lycopersicum chromosome ch08, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A3Q7HPR4	0.0	A0A3Q7HPR4_SOLLC; Uncharacterized protein
STRING	Solyc08g062200.1.1	0.0	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3505	20	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	9e-06	RWP-RK domain-containing protein