PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00713g11024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 363aa    MW: 41176.3 Da    PI: 6.5198
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00713g11024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.4e-32223278156
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                               k+r++W+peLH+rFv a++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  Peinf101Scf00713g11024.1 223 KQRRCWSPELHRRFVAALHQLGGAQVATPKQIREIMKVDGLTNDEVKSHLQKYRLH 278
                               79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.512220280IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.4E-30220281IPR009057Homeodomain-like
SuperFamilySSF466896.09E-18221281IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-26223278IPR006447Myb domain, plants
PfamPF002495.5E-7225276IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010092Biological Processspecification of organ identity
GO:0010629Biological Processnegative regulation of gene expression
GO:0048449Biological Processfloral organ formation
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MCSNSKEMNI DLNFVYVPKI ISDVLTEVSA IDDISKKLSK LNSFAFSLED ELKKIEGFKR  60
ELPLCMLLLK DAIERLKEEA LQYKGKNKSP VMGEFIPLKV NSDESGRVKK SNDISDKKNW  120
MSSVQLWSTP VHYESSDFEK KGHFLQLKSS GVEEKERENQ YGRGAFVPFQ EKSVVKEEKD  180
GIAVEELSLC MTVGEGEKGK NPIDVKRDEG KSNGYLQDKA QRKQRRCWSP ELHRRFVAAL  240
HQLGGAQVAT PKQIREIMKV DGLTNDEVKS HLQKYRLHVR RVPITSCSWS TMDEHEHEHG  300
ESSKTNATQS GSPEGPLHFN GSAKGMSTND GETMEENDQE EDNKSESYTN WNGQHPKSIE  360
AHV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-13223276154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-13223276154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-13223276154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-13223276154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-13223276255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00475DAPTransfer from AT4G37180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016487914.10.0PREDICTED: uncharacterized protein LOC107807956
TrEMBLA0A1S4BGB30.0A0A1S4BGB3_TOBAC; uncharacterized protein LOC107807956
STRINGXP_009796235.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84972229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.16e-56G2-like family protein