PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00692g04010.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

HD-ZIP

Protein Properties

Length: 745aa MW: 81855.3 Da PI: 5.3418

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00692g04010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.1	4.7e-21	76	132	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r++ +++t++q++eLe++F+++++p+ ++r+eL+++lgL+ q+k+WFqN+R+++k+ Peinf101Scf00692g04010.1 76 RKRYHRHTQHQIQELEAYFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKN 132 789999************************************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.0E-22	57	131	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.38E-19	68	133	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.491	73	133	IPR001356	Homeobox domain
SMART	SM00389	1.8E-20	75	137	IPR001356	Homeobox domain
CDD	cd00086	2.20E-20	75	134	No hit	No description
Pfam	PF00046	1.3E-18	76	131	IPR001356	Homeobox domain
PROSITE pattern	PS00027	0	108	131	IPR017970	Homeobox, conserved site
PROSITE profile	PS50848	43.446	258	490	IPR002913	START domain
SuperFamily	SSF55961	2.95E-35	260	489	No hit	No description
CDD	cd08875	3.39E-125	262	486	No hit	No description
SMART	SM00234	5.3E-60	267	487	IPR002913	START domain
Pfam	PF01852	1.2E-54	268	487	IPR002913	START domain
Gene3D	G3DSA:3.30.530.20	8.0E-7	363	482	IPR023393	START-like domain
SuperFamily	SSF55961	1.05E-24	511	737	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0008289	Molecular Function	lipid binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence Send to blast
MASLVVNDGS NNGFADSGIP LVQSSSMMDI PFHSLDMISN TSGSEMQRLR EDFGNKSGSE 60 GNSVDDEQAV NKSLKRKRYH RHTQHQIQEL EAYFKECPHP DDKQRKELSR ELGLEPLQIK 120 FWFQNKRTQM KNQHERHENS HLRAENEKLR AENLRFREAL GNASCINCGT GQPPVGEMSY 180 DEHQLRLENT RLREEIERIS NIAAKYVGKP FLNHNGYSQS NTRPLDIGIP AFSAQQSVDG 240 EAYGDHGEDV ISSIIGPSEA EKPFIIELAV AAMEEFVQMA QMAEPLWFPS IERGTTLLNE 300 EEYFRIFPRG IGPKPAGFKT EASRETAVVI MNHVNLVEIL MDVNHWSSMF AGVVSRASTI 360 DVLSTGVAGN FNGALQVILA EFQVPSPQVP TRECYFARYC KHRADGTWAV VDVSLDHLRA 420 TPVDRCRRRP SGCLIQEMPN GYSKVTWVEH VEVDDGAVHD IYKPLVSSGL AFGAKRWLAT 480 LDRQCERLAS AMATNIPNND ISNMVLANQD SRKSMLKLAE RMVISFCSGV SATTANQWTT 540 LSGSGSDDVR VMTRKSVDDP GRPPGIVLSA ATSFWLPISP KTVFDFLSDE NTRNEWDILS 600 NGGVVQEMAH IANGRETGNC VSLLRVDSSN SNQSNMLILQ ESITDPTGSF VIYAPVDIAA 660 MNIVLGGGDP DFVALLPSGF AILPDGPPGS GRPNGSGGSL LTVAFQILVD SVPTAKLSLG 720 SVATVNNLIS CTVERIKSAL LSETP

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence Send to blast

MASLVVNDGS NNGFADSGIP LVQSSSMMDI PFHSLDMISN TSGSEMQRLR EDFGNKSGSE  60
GNSVDDEQAV NKSLKRKRYH RHTQHQIQEL EAYFKECPHP DDKQRKELSR ELGLEPLQIK  120
FWFQNKRTQM KNQHERHENS HLRAENEKLR AENLRFREAL GNASCINCGT GQPPVGEMSY  180
DEHQLRLENT RLREEIERIS NIAAKYVGKP FLNHNGYSQS NTRPLDIGIP AFSAQQSVDG  240
EAYGDHGEDV ISSIIGPSEA EKPFIIELAV AAMEEFVQMA QMAEPLWFPS IERGTTLLNE  300
EEYFRIFPRG IGPKPAGFKT EASRETAVVI MNHVNLVEIL MDVNHWSSMF AGVVSRASTI  360
DVLSTGVAGN FNGALQVILA EFQVPSPQVP TRECYFARYC KHRADGTWAV VDVSLDHLRA  420
TPVDRCRRRP SGCLIQEMPN GYSKVTWVEH VEVDDGAVHD IYKPLVSSGL AFGAKRWLAT  480
LDRQCERLAS AMATNIPNND ISNMVLANQD SRKSMLKLAE RMVISFCSGV SATTANQWTT  540
LSGSGSDDVR VMTRKSVDDP GRPPGIVLSA ATSFWLPISP KTVFDFLSDE NTRNEWDILS  600
NGGVVQEMAH IANGRETGNC VSLLRVDSSN SNQSNMLILQ ESITDPTGSF VIYAPVDIAA  660
MNIVLGGGDP DFVALLPSGF AILPDGPPGS GRPNGSGGSL LTVAFQILVD SVPTAKLSLG  720
SVATVNNLIS CTVERIKSAL LSETP

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019223745.1	0.0	PREDICTED: homeobox-leucine zipper protein HDG2-like
Swissprot	Q94C37	0.0	HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBL	A0A314KYP4	0.0	A0A314KYP4_NICAT; Homeobox-leucine zipper protein hdg2
STRING	XP_009766038.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA932	24	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05230.4	0.0	homeodomain GLABROUS 2