PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00665g21001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 28797.4 Da PI: 7.1154 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.9 | 2e-19 | 5 | 140 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevi.kevdiykv.ePwdLpk........kvkaeekewy.fFskrdkkyatgkrknr 76 GfrF+P+d+e + +L + +++++l+ +i ++vd+y ePw++ + +a++ + y fF+++ k + +gkr +r Peinf101Scf00665g21001.1 5 LGFRFRPSDSERL-AFLLRFIAKHDLQDRGFIsTNVDVYGKeEPWEIYHrgvpcgrgDGEAQDCSSYrFFITKLKMKDSGKRFKR 88 6**********99.8899999999988878861566*996549****7446777654222233333449999999999******* PP NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 + +g+Wk+ + k+v ++k+ ++glkk++ + ++ ++++ +W+m+ey++ Peinf101Scf00665g21001.1 89 EVGKGTWKQD-NGKPVRNEKSVVIGLKKSMSYVNKkLDSEALGGKWLMKEYEF 140 ********76.55899999**************65256777899*******85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-18 | 3 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.135 | 3 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-11 | 6 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MEFELGFRFR PSDSERLAFL LRFIAKHDLQ DRGFISTNVD VYGKEEPWEI YHRGVPCGRG 60 DGEAQDCSSY RFFITKLKMK DSGKRFKREV GKGTWKQDNG KPVRNEKSVV IGLKKSMSYV 120 NKKLDSEALG GKWLMKEYEF SKVILQHFPQ DCKNYVLCAI RKKPTTSLNS SVRHQETSTT 180 SVDNSWAMVS SSEQNSTWLN FQEEAMLLND SSATIFHDDF TTFESMPDHN WDKRELDDLD 240 IREFLNGI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016475806.1 | 5e-60 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1S4AGN1 | 1e-58 | A0A1S4AGN1_TOBAC; NAC domain-containing protein 78-like | ||||
TrEMBL | A0A314KLA0 | 2e-58 | A0A314KLA0_NICAT; Uncharacterized protein | ||||
STRING | XP_009621726.1 | 5e-59 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16324 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-13 | NAC-domain protein 101 |