PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00650g18028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 285aa    MW: 32457.1 Da    PI: 7.9185
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00650g18028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-121449137
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                              +g W++eEde+l++ ++++G g+W+++++  g +Rtl
  Peinf101Scf00650g18028.1 14 KGLWSPEEDEKLIEHITKYGHGCWSSVPKLAG-TRTL 49
                              678*****************************.**97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-15648IPR009057Homeodomain-like
PROSITE profilePS5129416.032984IPR017930Myb domain
SMARTSM007173.8E-101382IPR001005SANT/Myb domain
SuperFamilySSF466894.69E-131481IPR009057Homeodomain-like
PfamPF002497.7E-101448IPR001005SANT/Myb domain
CDDcd001676.00E-101777No hitNo description
Gene3DG3DSA:1.10.10.607.7E-115797IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGRHSCCYKQ KLRKGLWSPE EDEKLIEHIT KYGHGCWSSV PKLAGTRTLL VFQLFLWSQI  60
AARLPGRTDN EIKNLWNSSI KKKLRKSGID PNTHKPLSEI ENEHQKASTT NTKNNDKSTS  120
ECNSAFNSEK PKPSSLTIDQ SYPLIETNMS SSTGYNLSFQ QLNYEPNTTT IELQNNCSLF  180
DNNNGFSWGA VDSVKSEKEA QEIKWSEYLQ TPFLLGNTIQ QNHQSTIIPQ DLYSETRSET  240
QFATQGSLSA TWLQSQHQQQ PNSLQTPDLY HKNFLRLPAA FGQYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4861524e-36AM486152.1 Vitis vinifera contig VV78X013095.7, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019169573.12e-77PREDICTED: myb-related protein Zm38-like
TrEMBLA0A2G9HHR34e-80A0A2G9HHR3_9LAMI; Transcription factor, Myb superfamily
STRINGPGSC0003DMT4000407745e-76(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2501022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.19e-50myb domain protein 61