PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00650g10009.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bZIP

Protein Properties

Length: 395aa MW: 43270.3 Da PI: 6.8635

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00650g10009.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.1	2.6e-15	190	245	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v + eN++L k+l +++++ + Peinf101Scf00650g10009.1 190 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQVRVENSSLLKRLTDISQKYNE 245 579*****************************************999999998875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.4E-12	184	243	No hit	No description
SMART	SM00338	9.6E-19	188	252	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.254	190	245	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.4E-13	191	243	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.33E-11	192	242	No hit	No description
PROSITE pattern	PS00036	0	195	210	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	8.2E-38	259	383	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MNRSSSEWTF QQFLKEATVA VDSTSTSSQQ IKDQSLNHNN NLIANHSKPI SEPPSFGSEP 60 LMTNIPIDSD EYQALLKRRL DLACAAFALT RANCVKPQDS ATLLPEKGSL TANAASQAGY 120 QVPPKGSGQE LAQVQDKDVA GLVGIPPLPA VQKKPGIQVR STTSGSSGEQ SDDDEAEGEA 180 ETTQQTDPTD VKRVRRMLSN RESARRSRRR KQAHLTELET QVSQVRVENS SLLKRLTDIS 240 QKYNESAVDN RVLKADVETL RAKVKMAEET VKRVTGLNPL FQAMSEISTM MMPSFTGSPF 300 DSSADAAVPE HVGPKSHYYQ APENSHMPIL DHRMQNGMLD IHPVGNVQQN PTTEAIGGNK 360 IDRTSSMHRV ASLEHLQKRI RGEGGTSATQ CTEQQ

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MNRSSSEWTF QQFLKEATVA VDSTSTSSQQ IKDQSLNHNN NLIANHSKPI SEPPSFGSEP  60
LMTNIPIDSD EYQALLKRRL DLACAAFALT RANCVKPQDS ATLLPEKGSL TANAASQAGY  120
QVPPKGSGQE LAQVQDKDVA GLVGIPPLPA VQKKPGIQVR STTSGSSGEQ SDDDEAEGEA  180
ETTQQTDPTD VKRVRRMLSN RESARRSRRR KQAHLTELET QVSQVRVENS SLLKRLTDIS  240
QKYNESAVDN RVLKADVETL RAKVKMAEET VKRVTGLNPL FQAMSEISTM MMPSFTGSPF  300
DSSADAAVPE HVGPKSHYYQ APENSHMPIL DHRMQNGMLD IHPVGNVQQN PTTEAIGGNK  360
IDRTSSMHRV ASLEHLQKRI RGEGGTSATQ CTEQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	211	RRSRRRKQ
2	206	211	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019229939.1	0.0	PREDICTED: light-inducible protein CPRF2-like isoform X2
Swissprot	Q99090	1e-134	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A314KKK6	0.0	A0A314KKK6_NICAT; Basic leucine zipper 63
STRING	XP_009787496.1	1e-173	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2934	24	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-66	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]