PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00614g00012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 517aa    MW: 56800.3 Da    PI: 7.387
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00614g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.57.4e-25189245259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +DgynWrKYGqK+vk+ + +rsYYrC++++C++kk +e+s++  +v+e++Y+++Hnh+
  Peinf101Scf00614g00012.1 189 RDGYNWRKYGQKQVKSPQGSRSYYRCSHSECCAKK-IECSDHTSRVIETIYRSQHNHD 245
                               7********************************98.*********************7 PP
2WRKY98.35.1e-31380437259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ ++++ ++itY+g H+h+
  Peinf101Scf00614g00012.1 380 SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNTSGLIITYKGVHDHD 437
                               7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-21184247IPR003657WRKY domain
SuperFamilySSF1182906.67E-20186247IPR003657WRKY domain
SMARTSM007747.3E-24188246IPR003657WRKY domain
PfamPF031061.3E-17190245IPR003657WRKY domain
PROSITE profilePS5081118.842190247IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.4E-32364439IPR003657WRKY domain
SuperFamilySSF1182903.27E-27373439IPR003657WRKY domain
PROSITE profilePS5081132.351374439IPR003657WRKY domain
SMARTSM007744.3E-36379438IPR003657WRKY domain
PfamPF031064.5E-24381436IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MDETVNQAVD DENLEREVSK KGNSSVQEGG VVDSSGGGCC KVMSGAESRG EDKAEIVNSE  60
TLVTVQSSVQ PKFDTDTSSS HQLSEVPVEY ALQPFDDSAK QIKDRISVTR AETLSAQAQT  120
EHRQHVPDEA SSMEPSPTSV TQSISSARSP TIEERQLSAV VNSTTGEVAK QSSDAKVLPI  180
VPVVKTPARD GYNWRKYGQK QVKSPQGSRS YYRCSHSECC AKKIECSDHT SRVIETIYRS  240
QHNHDPPPRV NCSRESKHTL LPAPANDNSI IARPNRSFNE TMPSSLKENL QEKTPIAETA  300
NQDSCGSDDD TEITIKEEHS DEPEQKKRQV LCSKHRIHPK FSPIVTRLKT SDTSCAESIS  360
KPGKKPKLVV HAACDVGISS DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIERAV  420
DNTSGLIITY KGVHDHDMPV PKKRHGPPSA PLAIAAAPSS LTNLQAEKSE LVQHQPTTQW  480
SVDKQGELTG EKLDLGGEKT MEPARTLLSI GFEIKPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-27190439275WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624879.10.0PREDICTED: probable WRKY transcription factor 32
SwissprotP595831e-112WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A1S4CV830.0A0A1S4CV83_TOBAC; probable WRKY transcription factor 32
TrEMBLA0A1U7XL730.0A0A1U7XL73_NICSY; probable WRKY transcription factor 32
STRINGXP_009624879.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-107WRKY DNA-binding protein 32