 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf00606g08019.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 310aa MW: 35638.2 Da PI: 4.3099 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00606g08019.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.7 | 4.1e-18 | 92 | 145 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++ ++q++ Le+ Fe ++++ e++ +LAk+lgL+ rq+ +WFqNrRa++k
Peinf101Scf00606g08019.1 92 KKRRLLPNQVQFLEKSFEVDNKLEPERKVQLAKELGLQPRQIAIWFQNRRARYK 145
45578899*********************************************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MEVRIVNESS NMTSTTNTVM LSNEKFPPSS EVLHSLWMSN SSPSFHGPAS MVNFEDGQGE 60
MTKERPFFTQ IEKEETSNND DYDSSCFHQP EKKRRLLPNQ VQFLEKSFEV DNKLEPERKV 120
QLAKELGLQP RQIAIWFQNR RARYKTKNLE KDYDVLKTSF DKLKADYDTL FKENEDLRNE 180
EKGKENSEQS EPISPIDEKE AEKAIPNVVT SDVQSMSKVV CKLEDASSAK SDVIDSDSPH 240
YTDGNHSSIY LEPADSSNIF EPEPSDFSQD EDDNLSKSFL CFPDIGDQIQ ASSCNLSFQI 300
EDQPCWFWQY
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975444 | 1e-107 | HG975444.1 Solanum pennellii chromosome ch05, complete genome. |
