PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00606g04020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 247aa    MW: 26785.7 Da    PI: 6.5341
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00606g04020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-11131178455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Peinf101Scf00606g04020.1 131 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 178
                               8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.67E-11125182No hitNo description
SuperFamilySSF474591.2E-17125193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-18127195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828127177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-8131178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10133183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MDPQATLMNN SGSFQSPPFN LAEIWNFPIN AGVGGGGSAT PYSFPSTAPG NRTKKRRGDD  60
DESVKGVSTS GNALSESDSK RPKATRSDEN SEPRGDEEGN SGKPAEQPAK PAEPPKDYIH  120
VRARRGQATD SHSLAERARR EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQHQ  180
VEFLSMKLEA VNSSTPSMEG FPAKDVGQQM FDTNAMAFAS QASREYAKGA SPDWLHMQLG  240
GGFERTT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0139791e-178BT013979.1 Lycopersicon esculentum clone 133024F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015076833.11e-139transcription factor BHLH094
SwissprotQ69WS34e-75BH094_ORYSJ; Transcription factor BHLH094
TrEMBLM1C2931e-138M1C293_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000582041e-138(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-85BIG PETAL P