PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00586g10027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HB-other
Protein Properties Length: 284aa    MW: 32395.7 Da    PI: 4.7898
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00586g10027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.85.1e-052332681454
                               HHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  14 eLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               eL+++F++     +e++++L +++gL+ +qV +WF N+R +
  Peinf101Scf00586g10027.1 233 ELKQEFKQ-----EEDKAKLVQETGLQLKQVNNWFINQRKR 268
                               55555554.....68999*********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012551.3E-1567111IPR005540KNOX1
PfamPF037905.9E-1670110IPR005540KNOX1
SMARTSM012563.4E-23121176IPR005541KNOX2
PfamPF037915.6E-18125175IPR005541KNOX2
Gene3DG3DSA:1.10.10.601.8E-14219274IPR009057Homeodomain-like
PROSITE profilePS500719.426220272IPR001356Homeobox domain
SMARTSM003890.0011220276IPR001356Homeobox domain
SuperFamilySSF466892.91E-8230274IPR009057Homeodomain-like
CDDcd000863.03E-8231272No hitNo description
PfamPF059201.3E-10241268IPR008422Homeobox KN domain
PROSITE patternPS000270247270IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAFHHFATTS SPAVGPDNDD VVSESISFSK KLSQQYLGER DEVMNNNDNN NNNISNNDQS  60
DNYWEKEKHK ADIMNHHLCD QLLSAHVACL RIATPVDQLP RIDEQLAQSQ NLVAKYYVVG  120
QSQRPIDDKD LDQFMTHYVL LLSSFKEQLQ QHVRVHAMEA VMACWELDQS LQNLTGVAPG  180
ESTGATMSDD DDDQAECDTN YYSGGLEAPD NTGFGPLVPT ESERFLMERV RQELKQEFKQ  240
EEDKAKLVQE TGLQLKQVNN WFINQRKRNW HTTASSSTQK SKRK
Functional Description ? help Back to Top
Source Description
UniProtMay have a role to play in formative events in ovule and embryo morphogenesis.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019243340.11e-146PREDICTED: homeobox protein knotted-1-like LET12
SwissprotO223001e-117LET12_SOLLC; Homeobox protein knotted-1-like LET12
TrEMBLA0A1J6IIA21e-144A0A1J6IIA2_NICAT; Homeobox protein knotted-1-like let12
STRINGXP_009775738.11e-144(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2550622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.11e-110KNOTTED1-like homeobox gene 3