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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00564g00012.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
NAC |
Protein Properties |
Length: 533aa MW: 59773.8 Da PI: 4.6215 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00564g00012.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 175.8 | 1.2e-54 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83
l+pGfrFhPtdeelv +yL++k++g+++++e i+e+diykvePwdLp +++++++ ewyfFs dkky +g r+nrat++gyW
Peinf101Scf00564g00012.1 10 LAPGFRFHPTDEELVRYYLRRKISGRPFKVEPPISEIDIYKVEPWDLPgmSRLRTRDLEWYFFSFLDKKYGNGARTNRATEKGYW 94
579***************************888***************5337777888*************************** PP
NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+tgkd++v+++k+++vg+kktLv+++grapkg++t+Wvmheyrl
Peinf101Scf00564g00012.1 95 KTTGKDRAVFRSKSQVVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 139
*******************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 533 aa
Download sequence Send
to blast |
MELRGSSNLL APGFRFHPTD EELVRYYLRR KISGRPFKVE PPISEIDIYK VEPWDLPGMS 60 RLRTRDLEWY FFSFLDKKYG NGARTNRATE KGYWKTTGKD RAVFRSKSQV VGMKKTLVYH 120 SGRAPKGQRT NWVMHEYRLI DEELGRAGIP QDAFVVCRVF QKSGAGPKNG EQYGAPFIEE 180 EWEDDELQVL PKGEAAEEFE FSDDICLDGN DLDQILRTVT AVDGAPLPLD SYYGENGSSE 240 ESNNSSNAQN WLHQPDEQKS TDLAVHQNVD VIPGMHLAVH QNVDVIPGMH EYIGESSKNV 300 NSEDVDYLLI EPIINATDDL QSINEAFLEA NDLSNPIETD TSSIDMLDEY LAFFDANDNF 360 ENMGFDSSFL QVIPPNQGLG EYGNNFVSSS KLEPTKFGSD HQLPFMKQAS QMLGNIHAPP 420 AFAAEFPTKD ATLRLNSLSH SSRSVHVTAG LIIRDMTEGG NGTGWPSGKR GDYNIILSFG 480 LSRGIDDSFV ESFYSIHPGK PTSIISRGWF YYLFLCILML SMSLRIGSII CAS
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-44 | 10 | 168 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-44 | 10 | 168 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-44 | 10 | 168 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-44 | 10 | 168 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-44 | 10 | 168 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-44 | 10 | 168 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-44 | 10 | 168 | 17 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AF509876 | 0.0 | AF509876.1 Petunia x hybrida nam-like protein 13 (NH13) mRNA, partial cds. |