PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00500g03003.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 309aa MW: 33545.7 Da PI: 6.9467

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00500g03003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.7e-39	34	91	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk+k+s Peinf101Scf00500g03003.1 34 QALKCPRCDSINTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRS 91 789****************************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.0E-33	35	90	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-27	35	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.646	36	90	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MQDIHAIGGG GARFFGGGGG GDRRLRPNNQ HNLQALKCPR CDSINTKFCY YNNYNLSQPR 60 HFCKSCRRYW TKGGVLRNVP VGGGCRKSKR SKPKSHTITT ATAVVDGSEE PKSNSHSSSE 120 SSSLTATTTA AAANTGTSAA AAEVVSANSS NVSSAMFLNF SESNFFVPNS TNSGFDHHQP 180 GLIDHTTEGQ MFQDIGNFTN LMTPSNDPGS FNMVEIPGWN HQHSKMDMET DHVKMEQMGN 240 SSGFMSQTSR VELSGLQQNK VNNSELGALD WQIGGGGEHG LYDLTGTVDQ SYWNQTQWGE 300 NDQSLNYLP

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00570	DAP	Transfer from AT5G60850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019225784.1	1e-104	PREDICTED: dof zinc finger protein DOF5.4-like
TrEMBL	A0A314KSY8	1e-103	A0A314KSY8_NICAT; Dof zinc finger protein dof5.4
STRING	XP_009779672.1	1e-102	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-38	OBF binding protein 4