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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf00500g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 298aa MW: 33836.1 Da PI: 6.4033 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00500g00007.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 178.6 | 1.7e-55 | 6 | 132 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeel+++yL++kv++ +++ ++i++vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+
Peinf101Scf00500g00007.1 6 LPPGFRFHPTDEELITYYLTNKVSNFNFTS-RAIADVDLNKCEPWDLPAKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKT 89
79*************************999.89***************999999******************************* PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
tgkdke++ +g lvg+kktLvfy+grapkgek++Wvmheyrle
Peinf101Scf00500g00007.1 90 TGKDKEIFG-GGILVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 132
*********.********************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MEEINLPPGF RFHPTDEELI TYYLTNKVSN FNFTSRAIAD VDLNKCEPWD LPAKASMGEK 60
EWYFFSLKDR KYPTGLRTNR ATEAGYWKTT GKDKEIFGGG ILVGMKKTLV FYRGRAPKGE 120
KSNWVMHEYR LETKLGFKPS KEEWVLCRVF HKNSTVKKPQ QTSSSPQSEE SPCDTYTLAN 180
ELGDIDITSY NGLAIPSSGI ISNISLQNYN NTHDNIMNLN MNLADAREAT SLLSSNIPLV 240
NSLLFRASQF QSQDIPHFGI DLYPNFTVDA PSSSMVLDPV HVQQQQPHEQ SYKLDSNI
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-58 | 1 | 158 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-58 | 1 | 158 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-58 | 1 | 158 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-58 | 1 | 158 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-58 | 1 | 158 | 15 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-58 | 1 | 158 | 12 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-58 | 1 | 158 | 12 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
