PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00482g03006.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

BBR-BPC

Protein Properties

Length: 316aa MW: 35323.2 Da PI: 9.9846

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00482g03006.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	324.4	3.4e-99	1	316	1	301
GAGA_bind 1 mdddgsrernkgyyepa.aslkenlglqlmssiaerdaki........rernlalsekkaavaerd................... 57 md +g ++ n+g++ep+ + lk +lglqlmss+ e+ + +++++ +++++++++ Peinf101Scf00482g03006.1 1 MDGHGGMNLNWGFFEPTaTVLKGHLGLQLMSSMDEK---PlfgntgghHQQHHHDLHHHQTHQPHHptvmestnggafhhhrvcg 82 99***********99899*********655...4445677775555545555555555556889999999999999* PP GAGA_bind 58 ........maflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklea 134 m++ +rd++l++ + ++k+++++l n ++ +g++ l++t+s++s+q+ + p+l + ++ e Peinf101Scf00482g03006.1 83 fsespsmpMDY-MRDAWLNH-----KDYREKYFSNVLSGN---HHYLTGYGFLPETSSAQSMQMNQLPNLVKVEPA-PQLE---- 153 *********.***9.....556788999988666...578899***********544554433222.2222.... PP GAGA_bind 135 lpieeaaeeakekkk..kkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtG 217 ++ +++++++ +kk k+q k+pk+kkakk+++ ++k+++ ++s +r++a++ks ++ +ng+++D+s++P+P+CsCtG Peinf101Scf00482g03006.1 154 -EVFQERDKSDLAKKrgAGKSQLLKSPKTKKAKKATR---APKDES-TPSI-PRARAPRKSAEILINGINMDISGIPIPICSCTG 232 .233333333333330033344555555555555554...665555.4554.79*************************** PP GAGA_bind 218 alrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 a +qCY+WG+GGWqSaCCtt++S yPLP++tkrrg+RiagrKmS gafkk+LekLa+eGy++snp+DLk +WAkHGtnkfvtir Peinf101Scf00482g03006.1 233 AAQQCYRWGCGGWQSACCTTNLSSYPLPINTKRRGSRIAGRKMSLGAFKKVLEKLASEGYNFSNPIDLKPYWAKHGTNKFVTIR 316 *********************************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06217	2.1E-99	1	316	IPR010409	GAGA-binding transcriptional activator
SMART	SM01226	6.5E-147	1	316	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
MDGHGGMNLN WGFFEPTATV LKGHLGLQLM SSMDEKPLFG NTGGHHQQHH HDLHHHQTHQ 60 PHHPTVMEST NGGAFHHHRV CGFSESPSMP MDYMRDAWLN HKDYREKYFS NVLSGNHHYL 120 TGYGFLPETS SAQSMQMNQL PNLVKVEPAP QLEEVFQERD KSDLAKKRGA GKSQLLKSPK 180 TKKAKKATRA PKDESTPSIP RARAPRKSAE ILINGINMDI SGIPIPICSC TGAAQQCYRW 240 GCGGWQSACC TTNLSSYPLP INTKRRGSRI AGRKMSLGAF KKVLEKLASE GYNFSNPIDL 300 KPYWAKHGTN KFVTIR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009761371.1	1e-178	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_009761378.1	1e-178	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_016499158.1	1e-178	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_016499159.1	1e-178	PREDICTED: protein BASIC PENTACYSTEINE2-like
TrEMBL	A0A1S4CDX5	1e-177	A0A1S4CDX5_TOBAC; protein BASIC PENTACYSTEINE2-like
TrEMBL	A0A1U7V4R1	1e-177	A0A1U7V4R1_NICSY; protein BASIC PENTACYSTEINE2-like
STRING	XP_009761371.1	1e-177	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10048	20	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14685.3	2e-82	basic pentacysteine 2