PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00480g12008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 116aa    MW: 13656.9 Da    PI: 10.296
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00480g12008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM116.82.1e-3641161127
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               lpp frFhPtdeel+++yL+++ + +++++ ++i+evd       ++      ++k+ yfFs rd+ky++g r+nra+ sgyWka
  Peinf101Scf00480g12008.1   4 LPPEFRFHPTDEELIMYYLCNQETLRPCPV-SIISEVDA------EF------GKKKRYFFSLRDRKYPNGIRPNRAVVSGYWKA 75 
                               6899**************************.88999995......34......56889*************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                               tg+dk+++s +++ vg+kk L+fykgr pkg ktdW++heyr
  Peinf101Scf00480g12008.1  76 TGTDKAIHS-GSKYVGIKKALMFYKGRPPKGIKTDWIIHEYR 116
                               *********.99*****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-423116IPR003441NAC domain
PROSITE profilePS5100532.6324116IPR003441NAC domain
PfamPF023655.8E-215116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
LRKLPPEFRF HPTDEELIMY YLCNQETLRP CPVSIISEVD AEFGKKKRYF FSLRDRKYPN  60
GIRPNRAVVS GYWKATGTDK AIHSGSKYVG IKKALMFYKG RPPKGIKTDW IIHEYR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-44411615139Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598866.15e-63PREDICTED: NAC transcription factor 29-like
RefseqXP_009781251.14e-63PREDICTED: NAC transcription factor 29-like
RefseqXP_016451619.14e-63PREDICTED: NAC transcription factor 29-like
RefseqXP_016492232.15e-63PREDICTED: NAC transcription factor 29-like
SwissprotK4BNG71e-61NAP2_SOLLC; NAC domain-containing protein 2
TrEMBLA0A1S3YHB41e-61A0A1S3YHB4_TOBAC; NAC transcription factor 29-like
TrEMBLA0A1S4BTM31e-61A0A1S4BTM3_TOBAC; NAC transcription factor 29-like
TrEMBLA0A1U7WVA71e-61A0A1U7WVA7_NICSY; NAC transcription factor 29-like
STRINGXP_009781251.12e-62(Nicotiana sylvestris)
STRINGXP_009598866.12e-62(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.18e-63NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]