PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00479g01021.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 329aa MW: 35822.7 Da PI: 6.9621

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00479g01021.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.8	6e-06	196	234	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++i s ++r+ ++ +s++ +Kae+L +++eY+k+L+ Peinf101Scf00479g01021.1 196 SKISSFSTKIRRAAVHN---KSERTNKAEMLDEVIEYLKQLE 234 45555555666666666...9*******************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	5.73E-4	192	238	No hit	No description
SuperFamily	SSF47459	3.53E-6	193	249	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.9E-5	209	242	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MHGLSPPGLP NNMPLSNSNY TLDHDYNPQS GGTLESIVNQ ATAIPHHRLN SAPVDGGGRE 60 REDELMFWLN NCLAYTMTTD ALVPTPTNTR NFHQRVAPSK YVPSITSTCL AGGSSGAVNG 120 RDSEIACDKM GADNEKVYHK PGHSDIIMLG TSKAEQSMMS SATRGDRDLP TERLLKAYGL 180 ISLEGEVGAE DEKKRSKISS FSTKIRRAAV HNKSERTNKA EMLDEVIEYL KQLEAQVQAI 240 RNTMMYPMML PMAAQQQLQM SMMSPAMRMR MDGLMDINAL THPNVTATPS VLHPAFSMHV 300 ASGVSPGGHL NAASTVPIVP NPLSTFQSQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009762879.1	8e-55	PREDICTED: transcription factor UNE10-like
TrEMBL	A0A1U7VKK7	2e-53	A0A1U7VKK7_NICSY; transcription factor UNE10-like
STRING	XP_009762879.1	3e-54	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA25285	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-14	bHLH family protein