PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00468g09014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 297aa    MW: 33461 Da    PI: 6.7984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00468g09014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14119166355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h  +Er+RR+r+ ++f +L  l+P++     +Kl+Ka+iL  A++YIk+L+
  Peinf101Scf00468g09014.1 119 QDHVLAERKRRERLTQSFITLSALIPNL-----RKLDKASILGDAIKYIKQLE 166
                               56999**********************9.....8*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-17108178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.094116165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-12119166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-17120181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.74E-14121170No hitNo description
SMARTSM003534.7E-16122171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MNMNDLHNVD HFQTMMGPFD ELPFNNNSFS SCTYGIQSSQ VAGFLEEKPA FFSSKKETHQ  60
NFFENSLNSV KTEVLPSGAT INFSSSAISM DSDFEAIGFG VGDFSHEKKS NSRTPLQAQD  120
HVLAERKRRE RLTQSFITLS ALIPNLRKLD KASILGDAIK YIKQLEEQVK ALEEQANKCD  180
EEPVVAVKRA RILSSYEDSS SFDENSNKST EKSVPEIEVR VSGGNILIRM YCKKQAKILK  240
EIFSQVENFH LTIISSSVIP FGYITTHITI IAKMDHQSSM KPENVVHKIR EAILKLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357745.11e-129PREDICTED: transcription factor bHLH18-like
TrEMBLM1D0K41e-122M1D0K4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000786991e-123(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-44bHLH family protein