PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00468g08014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 308aa    MW: 34418.6 Da    PI: 7.4568
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00468g08014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-13151197455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h  +E++RR+++ ++f  L  l+P +     kKl+Ka++L  A++YIk+L+
  Peinf101Scf00468g08014.1 151 GHVLAEKKRRQQLSQRFIALSALIPDL-----KKLDKASVLGDAIKYIKQLK 197
                               58899**********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.624147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-11151196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-16152211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.43E-13152201No hitNo description
SuperFamilySSF474594.97E-16152214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-14153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MNTDHVFFNH CQTMTQFDHS SFYNNPNFST CTYPSTIEAY SQAAGILEEN LAAFFSTPRM  60
ETQQNSSNFS SPPKVISFSN SPIATTAAPK YFENLNASVK SEVPSSRTTI NFSSSAISIY  120
SDFEDSQHTI QELGFDTQKK SCNRTGLQAQ GHVLAEKKRR QQLSQRFIAL SALIPDLKKL  180
DKASVLGDAI KYIKQLKERV KTLEENSKKC SKEPVVTVKR ARLLSNYDDS IFSDENSNIS  240
TERSSFQDIE VRASAENVLI NIYCNKQSGR IKEIFSQVEN LSLNIISSSA MPIGENITNI  300
TIIAQVLT
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016562188.14e-92PREDICTED: transcription factor bHLH18-like
SwissprotQ9T0727e-38BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1U8G0M39e-91A0A1U8G0M3_CAPAN; transcription factor bHLH18-like
STRINGXP_009605673.17e-88(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-40bHLH family protein