PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00461g04013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 329aa    MW: 37448 Da    PI: 4.8838
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00461g04013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM323.7e-10127466128
                       NAM  66 kkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +k+  gk+ nr +++ g Wka  ++k+v++kkg+++g  kt+ f ++++++ ++ +W+m+ey l
  Peinf101Scf00461g04013.1  12 RKTVCGKNFNRkVAAGGSWKARDTKKQVHDKKGAVIGFMKTFRFDEENSSE-KNIQWTMKEYCL 74 
                               56667899999778899***************************9655555.89********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.591101IPR003441NAC domain
SuperFamilySSF1019413.14E-1114101IPR003441NAC domain
PfamPF023654.1E-52074IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MLLQPEVWLL KRKTVCGKNF NRKVAAGGSW KARDTKKQVH DKKGAVIGFM KTFRFDEENS  60
SEKNIQWTMK EYCLSDIVLK ELRQGCQIRH EDYVLCRMRR KVKFCSKNRQ DGENVVANVK  120
VENLDNAPSF SEDYSQLQES QDLGHANANV KVENLDNVPS FSEDHGQLQE SQDLGHANAT  180
VSSAQLKNLH GGEDFSVDIL KDQNHDLDVP SCSSIHGNTK SPVPLQENSA PSDYIQLSNF  240
LNEKEKWCSL VSLLTTESNI YDPIAQLPLF IEQEQFYVPM VQDIPSNCAN KEPLEESRLP  300
MFPEPVQSLT EEELAFFDKP DPEYPHANI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2500122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.11e-06NAC domain containing protein 89