PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00445g14003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 211aa MW: 24206.4 Da PI: 9.5921 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.6 | 3.9e-26 | 7 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyW 83 lp+G+rF Ptdeel+ yLk+ v + +l+ ++ik +d++ +++Pw++ ++++ek yfFsk ++ ++++ + r + + g+W Peinf101Scf00445g14003.1 7 LPMGVRFCPTDEELI-IYLKRFVLRGQLPSYDAIKVADLFgELQPWQIF-GANSKEKARYFFSKLKNFKNSKIKFARtVGEIGTW 89 799************.9***********999******987368*****6.677888999******************66679*** PP NAM 84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k + +d++++++ +++++g k++L + ++ ++k ++ +W+m+ey+l Peinf101Scf00445g14003.1 90 KGQNSDEPIKDHeSNKVIGFKRSLKYQTA-KEKDQSDRWLMKEYTL 134 **********9866778********9855.5555899*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.75E-26 | 5 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.761 | 7 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.1E-17 | 8 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MSSGSKLPMG VRFCPTDEEL IIYLKRFVLR GQLPSYDAIK VADLFGELQP WQIFGANSKE 60 KARYFFSKLK NFKNSKIKFA RTVGEIGTWK GQNSDEPIKD HESNKVIGFK RSLKYQTAKE 120 KDQSDRWLMK EYTLQKNNSP VENNKDIVVL CKIEDKKAKK KTDNLDTYEV TEGEADEVIA 180 NLLGNNSHKS MQQPSSSHDQ AGVEQYWNRS A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009604942.1 | 3e-59 | PREDICTED: NAC domain-containing protein 41-like | ||||
TrEMBL | A0A1S4AII0 | 9e-58 | A0A1S4AII0_TOBAC; NAC domain-containing protein 101-like | ||||
STRING | XP_009604942.1 | 1e-58 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15231 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 8e-14 | NAC domain containing protein 94 |