PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00442g01018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | G2-like | ||||||||
Protein Properties | Length: 115aa MW: 12994.4 Da PI: 5.9075 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 51.4 | 2.3e-16 | 57 | 87 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 + AtPk++le m+vkgL+++hvkSHLQ+YR+ Peinf101Scf00442g01018.1 57 KGATPKQVLEQMNVKGLSINHVKSHLQMYRS 87 569***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.53E-6 | 55 | 88 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.9E-14 | 57 | 88 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.1E-12 | 57 | 89 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
MQACSDDSFA SLGRSPSFDL NEVATNITHD QEHEDYEVSS FIGDHEAYEN ELLIERKGAT 60 PKQVLEQMNV KGLSINHVKS HLQMYRSKKL QDSGSVLSPS SRLINGKAHL EMYQR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010657046.1 | 7e-17 | PREDICTED: uncharacterized protein LOC104880828 | ||||
TrEMBL | F6H504 | 2e-16 | F6H504_VITVI; Uncharacterized protein | ||||
STRING | VIT_12s0028g02080.t01 | 3e-17 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA25336 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 2e-13 | G2-like family protein |