PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00441g08004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 233aa    MW: 26175.6 Da    PI: 8.4918
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00441g08004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12119166355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++Er+RR++i + f  L  llP +     kK++Ka+iLe A   Ik+L+
  Peinf101Scf00441g08004.1 119 QEHVIAERKRRQKITKLFVSLAALLPGL-----KKMDKASILEGAATLIKQLR 166
                               6799************************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-13110171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.615116165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-10119165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-12120178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.36E-9121166No hitNo description
SMARTSM003533.5E-10122171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDDLALIFSH NKCASPFRKQ ENNRETTRKR LHQDEKAAAL ACIISFSSTT PNSQYSSTAA  60
GFNKNQNSQV LEPLIIPKVE ANNASTISFS PLVSQNYQNI SEHVQFGGST RIRSEEQAQE  120
HVIAERKRRQ KITKLFVSLA ALLPGLKKMD KASILEGAAT LIKQLRGRPD QTVKDQLETK  180
TNNEEAIPEV KIARNNQHTS SDMSNLPEVE MNDEFCETID HLAEKLRLSI LKM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488691.14e-68PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S4BIK19e-67A0A1S4BIK1_TOBAC; transcription factor bHLH18-like
STRINGXP_009774018.14e-64(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14501910
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-17bHLH family protein