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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00441g01003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
TCP |
Protein Properties |
Length: 383aa MW: 44218.1 Da PI: 6.9611 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00441g01003.1 | genome | SGN | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 132.8 | 3.3e-41 | 118 | 249 | 2 | 136 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86
+gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ +++ aikel + s+ +++c+++ss+ ++ ++s
Peinf101Scf00441g01003.1 118 TGKKDRHSKICTAQGVRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSNNAIKELLANISQENNSCNSNSSNDQGRKES 202
79**************************************************************999999995555555555333 PP
TCP 87 sgkaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
+ + + + ++++++ + + ++nl k ++ a++ e+++ekm+ik ++
Peinf101Scf00441g01003.1 203 K-FEVPLSLEKSNNEVKVKDHRNLRKMESIGAKEM--ESNKEKMMIKRHK 249
3.344444466666666667888888777666666..8999999998765 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MFPKSNINDL FPYNEDELLK QSFTYDYHQN PNSTSRVELD HPFFSHFPSP FLDVQEYPLS 60 QIFSQELDAS HDHDIEADLD ISRSMEDQSL NPGKKIPPEP SSPSSKKRKL SAKPRRRTGK 120 KDRHSKICTA QGVRDRRMRL SLQIARKFFD LQDMLGFDKA SKTIEWLFSK SNNAIKELLA 180 NISQENNSCN SNSSNDQGRK ESKFEVPLSL EKSNNEVKVK DHRNLRKMES IGAKEMESNK 240 EKMMIKRHKK GKELYESTNP NNIESNIFCN KDTTQEKSTS PHEANSQTLE HQFANVGIME 300 SYLGGTSSSL TSIFDNHENN IEVRGRDNYD NCFMSYLENW DIKNTSSSSY RSTTMTNEIQ 360 MPFAGNLSSI YLDNSRFQFQ HLD
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 106 | 116 | KRKLSAKPRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KR002104 | 0.0 | KR002104.1 Petunia x hybrida TCP transcription factor 2 (TCP2) mRNA, complete cds. |