PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00434g02022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 383aa    MW: 41786 Da    PI: 7.7249
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00434g02022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57.2e-3496150155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Peinf101Scf00434g02022.1  96 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 150
                               79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.48593153IPR017930Myb domain
SuperFamilySSF466891.08E-1795150IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.0E-3295151IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2596151IPR006447Myb domain, plants
PfamPF002491.7E-998149IPR001005SANT/Myb domain
PfamPF143794.0E-23183229IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MVLHLRASNF TEAKYSGNFV KSAIEPKSLA LDMFCMLNIP VFSAQVCTDL AKKHPCPSLI  60
HKNLTVRSQS LDSGGSTMDP INGGNNLSNN PSLASKQRLR WTHELHERFV DAVAQLGGPD  120
RATPKGVLRV MGVQGLTIYH VKSHLQKYRL AKYLPDSSSD GKQSDKKESR DMLSSLDGSS  180
PGVQINEALK LQMEVQKRLH EQLEVQRQLQ LRIEAQGKYL KKIIEEQQRL SGVLSEVPGS  240
GVTPLLAGDN GLESDNRTDP GTPAPTSESP HVDKPAQEHA SSKSLSIDQS FSSQHEPLTP  300
DSGCNETFPI DSPKGERSSK KQRVGTSAAF SEADMLLPHQ ILESSLSSAY QQPNPVFLAR  360
DQFNHSSALS LGSEVPKVSG SNM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-2496153158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-2496153158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-2496153158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-2496153158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-2496153259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027768901.10.0myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW01e-124PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A0V0I5H70.0A0A0V0I5H7_SOLCH; Putative myb family transcription factor APL-like
STRINGPGSC0003DMT4000226610.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-98G2-like family protein