PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf00362g09015.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 246aa MW: 27946.8 Da PI: 9.5411

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00362g09015.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.1	3.3e-14	71	153	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fY+++Ak+ Fs++k++ kk+ ++ + it r++ C + gk+++ +++ ++++Cka + ++ + + we++++ Peinf101Scf00362g09015.1 71 DFYQDHAKKHEFSITKRSCKKQsSEYELITARRLSCRRAGKPARYQST----------KKVDCKAGIYATLCSdRTSWEIQSVTV 145 6************999988846777899*******9987766..........9*********9999***** PP FAR1 84 eHnHelap 91 +HnH+l p Peinf101Scf00362g09015.1 146 KHNHDLEP 153 ***975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.1E-10	71	153	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MQSFMDVEES SSNSQVGPDD SLFDNRSNSS MAGENNEPNV VTGESPGIDP RAPARGSTVG 60 MKFPSLEAMV DFYQDHAKKH EFSITKRSCK KQSSEYELIT ARRLSCRRAG KPARYQSTKK 120 VDCKAGIYAT LCSDRTSWEI QSVTVKHNHD LEPRLSWLMA AHRKVTHALK RDFVAADTAG 180 VRPCRSFRTM EIMNGGTENI GCLPRDCRNF INQHRKMRLK HGDAEALKFF FNICILRMKD 240 SFTRWI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7498	2	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-14	FAR1 family protein