PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00360g00020.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 454aa MW: 50182.1 Da PI: 6.7336

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00360g00020.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18	5.1e-06	319	358	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Peinf101Scf00360g00020.1 319 RREKISQRMKLLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 358 9***************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.166	307	357	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.0E-4	313	363	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.4E-12	318	375	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.19E-6	319	362	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.3E-12	320	375	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
MDNDYFSNGV TTPPLQFEPM IPLSSLHSNQ ELNSISVQSS NSFPNTHWDN NSTEQYTHFN 60 SALSSIVSSP VASNSLNSNS LGLQELIGKL GTICSPYDNS NINNNINSDS TMTSCYTTPL 120 NSPPKLHIPI IDQLGKSNIS ILGNAVPMNP ASFPNHSADP RFTHRAAKFS CLGSRSFNDR 180 TSQAGLNNEN LPRVSSSPSL KKIGSPIQNQ NLGQLHVEKN CARIERNANC NEESSVSEQI 240 PSEISSRKRK AVSRGKGKKN GKSLVGNVVE TEDGTREKRS KSTEDKMEES KGSEGDETEK 300 EAKEKEKVVE PPKDYIHVRR EKISQRMKLL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ 360 VEFLSMKLAS VNPRLDLHID NLLPKDICQL NGSLSQHVPL NGYGDNLTQY PIICEDDLQS 420 IVQMGFSQNS NQDLTLHSQT FSVPNSTSFM KIEM

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

MDNDYFSNGV TTPPLQFEPM IPLSSLHSNQ ELNSISVQSS NSFPNTHWDN NSTEQYTHFN  60
SALSSIVSSP VASNSLNSNS LGLQELIGKL GTICSPYDNS NINNNINSDS TMTSCYTTPL  120
NSPPKLHIPI IDQLGKSNIS ILGNAVPMNP ASFPNHSADP RFTHRAAKFS CLGSRSFNDR  180
TSQAGLNNEN LPRVSSSPSL KKIGSPIQNQ NLGQLHVEKN CARIERNANC NEESSVSEQI  240
PSEISSRKRK AVSRGKGKKN GKSLVGNVVE TEDGTREKRS KSTEDKMEES KGSEGDETEK  300
EAKEKEKVVE PPKDYIHVRR EKISQRMKLL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ  360
VEFLSMKLAS VNPRLDLHID NLLPKDICQL NGSLSQHVPL NGYGDNLTQY PIICEDDLQS  420
IVQMGFSQNS NQDLTLHSQT FSVPNSTSFM KIEM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016506308.1	1e-174	PREDICTED: transcription factor bHLH62-like isoform X1
TrEMBL	A0A1S4CYT5	1e-173	A0A1S4CYT5_TOBAC; transcription factor bHLH62-like isoform X1
STRING	XP_009596972.1	1e-172	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1057	23	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-59	bHLH family protein