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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00339g00010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
bZIP |
Protein Properties |
Length: 344aa MW: 37991.9 Da PI: 6.4444 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00339g00010.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 145 | 201 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
kr++r NR +A+rs +RK +i eLe+kv++L++e ++L +l + + ++
Peinf101Scf00339g00010.1 145 KRAKRILANRQSASRSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTQFTN 201
9*****************************************999877766666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MQDPSNPNNS KTPSFTSTFR PPHHRRAHSE VNFRLPEDLD LGSDPFDGSG TGSFEEIGSE 60 DDFFSTYMDI EKLGSGSNPN DISGFNNNAG GGGSSGHVAD GGVMRPRHRH SNSVDSSSLL 120 LSESIEAKKA MAPDKLAELW TIDPKRAKRI LANRQSASRS KERKARYITE LERKVQTLQT 180 EATTLSAQLT LFQRDTTQFT NENTELKLRL QAMAQQAQLR DALNEALKQE VERLRMATGE 240 MSSSSDAYNL GMQHIPYNQS AFFSHQPQSG PSESQNIQMQ QFQSLQDSLL TPHRRLLSGH 300 QALPDTMQQD PLGRFQGLDI GGRGMHLVKT EAPSISASES SSTL
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Functional Description ? help
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Source |
Description |
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975445 | 1e-112 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |
GenBank | HG975518 | 1e-112 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]
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