PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00337g03028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 440aa    MW: 50930.9 Da    PI: 6.0061
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00337g03028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.22.9e-31151481128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyW 83 
                               lppGfrF P+de l  +yL +kv+g+ +    +i ++d+y+++P +Lp  +++ee+ +y+F++r++ky++g+++ r tk   gyW
  Peinf101Scf00337g03028.1  15 LPPGFRFMPSDEVLCEYYLLRKVNGEYIMP-GIILDTDVYQINPFQLP-GMDTEEQYTYYFTRRERKYPNGSKSARGTKdgVGYW 97 
                               79*************************877.89***************.677888999******************88845689* PP

                       NAM  84 katgkdkevlsk....kgelvglkktLvfykg..rapkgektdWvmheyrl 128
                               k t ++++ ++     +ge+ g k+tLv++ +    ++ +kt+W+mhe++l
  Peinf101Scf00337g03028.1  98 KMTNSKNNGKVPkdclEGEELGKKNTLVYFLKspVGQRDVKTNWIMHEFEL 148
                               *9999776666556889999**********4312455667*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.29E-3613176IPR003441NAC domain
PROSITE profilePS5100540.03215176IPR003441NAC domain
PfamPF023659.9E-1916148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MSKEKEVAAD WKKQLPPGFR FMPSDEVLCE YYLLRKVNGE YIMPGIILDT DVYQINPFQL  60
PGMDTEEQYT YYFTRRERKY PNGSKSARGT KDGVGYWKMT NSKNNGKVPK DCLEGEELGK  120
KNTLVYFLKS PVGQRDVKTN WIMHEFELAD RLLASTSQHP QQKQFNGMVL CRIYHRGKGE  180
STDDEEQKDN SRNEPKQADY TNNREPLLPP PPSRQQQQEQ QQQQLCPKLQ SPSKRKFEPN  240
ESSINIGSRV IHEHKQVNHI NNQETLPSQP QQHQQQQLLL PKLPLPPEQR FETNETITSH  300
PQIAKKLKLY AGHDQQAAAI LDNNMNANNG VGQENPLTYH IPLEMVQHIH STRAENVTLS  360
TEEENTRGIL HVKTEENGSN DHPQFEMSHN IIRDECIPLV SENYWASPTE EWEEAVSNMP  420
LEQLNYYMDV FNCDRSPTLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-2911761168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1918223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.17e-33NAC family protein