PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00318g07018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TALE
Protein Properties Length: 681aa    MW: 76657.6 Da    PI: 6.7745
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00318g07018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.31.5e-094815181954
                               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               Fe   ++yps++++  L++++gL+++qV++WF N R +
  Peinf101Scf00318g07018.1 481 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 518
                               554459******************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.0E-48261410IPR006563POX domain
PfamPF075262.8E-46266409IPR006563POX domain
PROSITE profilePS5007112.422459522IPR001356Homeobox domain
SMARTSM003891.8E-9462526IPR001356Homeobox domain
CDDcd000867.51E-12462523No hitNo description
SuperFamilySSF466897.27E-17463529IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-28465528IPR009057Homeodomain-like
PfamPF059207.5E-18479518IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    Send to blast
MSQSFHQGFY NFSNVYERSA NKHEDMLRVQ GYESLPPPPP QQVEVEPPAT VYDGGGMLTE  60
IISYPSAWRK SATEMLDDQI QASYRPWPQK EQQQQLPPTI NDVELPLMNP HMKVSSPPRS  120
SSSLHMLLPN SADTNSLLHH QGFHLLNSAT AEPPSQFTWV PVMSSTGSGS GEDNSTRIGR  180
VVDGQGLSLS LSRNFEAAAK LEDLRIGNGG IYLQNNQGLL GINNNNHHHQ HQLLHSGVIM  240
DHRTPQTSHQ VHVGYAAAAS PRITNVLRNS RYVKATQELL EEFCCVGRGN FKNQRVKKCD  300
DENPNDSENN RDVGSSSSKD INHPPLSAAE KSEYQRRKIK LLSMLDEACN FFILFSILVD  360
ARYTRYCEQM QAMVNSFDSM IGYGAASPYT ALAQKAMSRH FRCIKDAIVT QLKQTCKFLG  420
EKDVAGNSGL TKGETPRLKM LDQKLRQQKA LHQMGMLDSD AWRPQRGLPE RSVNVLRAWL  480
FEHFLHPYPS EADKHLLSRQ TGLSKNQVSN WFINARVRLW KPMVEEMYQQ ETKEEETDQE  540
EENHEEKQES AAQTPMHYDK TTSPTTTIPL SSVRSEFNAN ERDTSKNIIN YRQYTLGNQQ  600
LVMLPNQQLG QDDNSAASSA THDVSTTVNH YFMADAADLG VSNGTFGSQQ AGDVSLTLGL  660
RHSENVPRKT TQFQLRDFGA Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16468526563Homeobox protein Meis2
3k2a_B2e-16468526563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009773433.10.0PREDICTED: BEL1-like homeodomain protein 4
RefseqXP_016504574.10.0PREDICTED: BEL1-like homeodomain protein 4
TrEMBLA0A1S4CUA50.0A0A1S4CUA5_TOBAC; BEL1-like homeodomain protein 4
TrEMBLA0A1U7W4A10.0A0A1U7W4A1_NICSY; BEL1-like homeodomain protein 4
STRINGXP_009773433.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60721721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-123BEL1-like homeodomain 2